RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CARD17Q5XLA6 110 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 TRIQKQ629K1 86 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 CADM3Q8N126 398 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 OR51A4Q8NGJ6 313 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 OR10S1Q8NGN2 331 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 OR2V1Q8NHB1 315 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 PNPLA2Q96AD5 504 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 ORAI1Q96D31 301 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 SIGLEC12Q96PQ1 595 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 NEURL2Q9BR09 285 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC22A4Q9H015 551 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF703Q9H7S9 590 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 B4GALT7Q9UBV7 327 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 MALT1Q9UDY8 824 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 GDF2Q9UK05 429 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 RCE1Q9Y256 329 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 KNTC1P50748 2209 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 DOCK10Q96BY6 2186 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 A0A0G2JMP0 313 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 A0A0X1KG70 313 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 PLA2G10O15496 165 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 UBL3O95164 117 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 WDPCPO95876 746 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 ENPP1P22413 925 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 GDF1P27539 372 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 UBE2NLQ5JXB2 153 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 WIPI1Q5MNZ9 446 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 TMEM244Q5VVB8 128 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 ABLIM2Q6H8Q1 611 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 CORO6Q6QEF8 472 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 NRARPQ7Z6K4 114 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 OR4M2Q8NGB6 313 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 OR2AJ1Q8NGZ0 328 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF671Q8TAW3 534 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 ASB5Q8WWX0 329 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF385AQ96PM9 386 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 WACQ9BTA9 647 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 ASCL3Q9NQ33 180 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 FAM206AQ9NX38 181 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 RHBDL2Q9NX52 303 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 FOXD3Q9UJU5 478 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 FBXL3Q9UKT7 428 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 HHLA2Q9UM44 414 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 FOXJ3Q9UPW0 622 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 EMC9Q9Y3B6 208 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 AHCTF1Q8WYP5 2266 aa12.69□□□□□ -0.38
RTFDC1-201ENST00000023939 TRAV8-7A0A075B6U6 113 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 TMEM269A0A1B0GVZ9 245 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 TPPPO94811 219 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 CD2P06729 351 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 UBCP0CG48 685 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 NBL1P41271 181 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 PITPNAQ00169 270 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 HYAL4Q2M3T9 481 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 C20orf196Q8IYI0 205 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF433Q8N7K0 673 aaPredicted RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 MDS2Q8NDY4 140 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 C19orf18Q8NEA5 215 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 OR6N1Q8NGY5 312 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 LGALS14Q8TCE9 139 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 CHAC2Q8WUX2 184 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 TSEN15Q8WW01 171 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 ABCG5Q9H222 651 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 MOB1AQ9H8S9 216 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 SEC61A2Q9H9S3 476 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 CENPMQ9NSP4 180 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 DHDHQ9UQ10 334 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 IGHV3-15A0A0B4J1V0 119 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 A0A0B4J203 849 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF716A6NP11 495 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF878C9JN71 531 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 EIF1AYO14602 144 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 CTDSPLO15194 276 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 TRAPPC6AO75865 159 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 POU3F2P20265 443 aaPredicted RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 TAB1Q15750 504 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 HES5Q5TA89 166 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 KLHL24Q6TFL4 600 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 CFAP77Q6ZQR2 320 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 ELMOD2Q8IZ81 293 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 SNRNP27Q8WVK2 155 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 PPP1R14AQ96A00 147 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 ZC3HAV1LQ96H79 300 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 C11orf54Q9H0W9 315 aaPredicted RBP12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 EMC7Q9NPA0 242 aa12.68□□□□□ -0.38
RTFDC1-201ENST00000023939 DMDP11532 3685 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 ANXA2P2A6NMY6 339 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 H0YC42 278 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 DHHO43323 396 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 SSX4O60224 188 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 GLSO94925 669 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 ANXA2P07355 339 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 IGFBP3P17936 291 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 MSR1P21757 451 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms