RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ST7LQ8TDW4 575 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 RNF141Q8WVD5 230 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 EGLN1Q9GZT9 426 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 PLEKHF2Q9H8W4 249 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 BTN1A1Q13410 526 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 FAM26EQ8N5C1 309 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 DEFB123Q8N688 67 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SLC30A7Q8NEW0 376 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 OR10J5Q8NHC4 309 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 C16orf52Q8NHV5 167 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SLC25A46Q96AG3 418 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 ARSGQ96EG1 525 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 TAS2R5Q9NYW4 299 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 TBX21Q9UL17 535 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 A0A1W2PPC4 97 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 OR6C65A6NJZ3 312 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SMLR1H3BR10 107 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 NDUFB7P17568 137 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 BSGP35613 385 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 HABP2Q14520 560 aaPredicted RBP11.69□□□□□ -0.54
SCN8A-209ENST00000627620 OR8G1Q15617 311 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 EMC4Q5J8M3 183 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 CORO6Q6QEF8 472 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 LYSMD2Q8IV50 215 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 OR1S2Q8NGQ3 325 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 LRP5LA4QPB2 252 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 KLK8O60259 260 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SIX6O95475 246 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 CTSLP07711 333 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SELEP16581 610 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 TBXA2RP21731 343 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 CYHR1Q6ZMK1 362 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 Q6ZNB5 142 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 FJX1Q86VR8 437 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 OR1M1Q8NGA1 313 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 LILRB4Q8NHJ6 448 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 ERVMER34-1Q9H9K5 563 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 DSCR3O14972 297 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 CALCBP10092 127 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 DEFA4P12838 97 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SELENBP1Q13228 472 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.69□□□□□ -0.54
SCN8A-209ENST00000627620 ARIH2OSQ8N7S6 290 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SHISA7A6NL88 538 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 TXNL1O43396 289 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 B4GALT3O60512 393 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 CXCL10P02778 98 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 CSF3P09919 207 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 CCR2P41597 374 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 ZNF468Q5VIY5 522 aaPredicted RBP11.69□□□□□ -0.54
SCN8A-209ENST00000627620 HPSE2Q8WWQ2 592 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SIAEQ9HAT2 523 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 SLC5A6Q9Y289 635 aa11.69□□□□□ -0.54
SCN8A-209ENST00000627620 PRKNO60260 465 aaPredicted RBP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 RUNX2Q13950 521 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 OR5H6Q8NGV6 325 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 EXO1Q9UQ84 846 aaKnown RBP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 KLF13Q9Y2Y9 288 aaPredicted RBP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 CHST2Q9Y4C5 530 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 TGM6O95932 706 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 OR8U8P0C7N1 319 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 S100A11P31949 105 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 SLC35A2P78381 396 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 RPL18Q07020 188 aaKnown RBP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 DMWDQ09019 674 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 TESK1Q15569 626 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 AARDQ4LEZ3 155 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 THEM4Q5T1C6 240 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 OR51F2Q8NH61 342 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 CRLF2Q9HC73 371 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 GSK3AP49840 483 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 AGFG1P52594 562 aaKnown RBP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 RPS23P62266 143 aaKnown RBP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 OR1N1Q8NGS0 311 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 OR51H1Q8NH63 302 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 GABARAPL1Q9H0R8 117 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 ARV1Q9H2C2 271 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 LOXL2Q9Y4K0 774 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 A3GALT2U3KPV4 340 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 UPK1AO00322 258 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 TMEM11P17152 192 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 NPBWR1P48145 328 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 FXNQ16595 210 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 CTU2Q2VPK5 515 aaKnown RBP11.68□□□□□ -0.54
SCN8A-209ENST00000627620 TMEM196Q5HYL7 178 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 SLC51BQ86UW2 128 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 OR51A4Q8NGJ6 313 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 RNF167Q9H6Y7 350 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 UFSP2Q9NUQ7 469 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 TRBV5-4A0A0C4DH59 114 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 PRRG2O14669 202 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 CEACAM5P06731 702 aa11.68□□□□□ -0.54
SCN8A-209ENST00000627620 PTBP1P26599 531 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms