RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 J3KTA2 159 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 J3QLI3 93 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 MRASO14807 208 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 PRSS23O95084 383 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 FSHBP01225 129 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 CST2P09228 141 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 SEC61A1P61619 476 aaKnown RBP13.59□□□□□ -0.23
LIM2-202ENST00000596399 PSG7Q13046 419 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 BPIFB2Q8N4F0 458 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 OR8J3Q8NGG0 315 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 C4orf45Q96LM5 186 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 RBP7Q96R05 134 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 SUCNR1Q9BXA5 334 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 POLR2J2Q9GZM3 115 aaKnown RBP13.59□□□□□ -0.23
LIM2-202ENST00000596399 POLR2J3Q9H1A7 115 aaKnown RBP13.59□□□□□ -0.23
LIM2-202ENST00000596399 EMC7Q9NPA0 242 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 TIMM10BQ9Y5J6 103 aa13.59□□□□□ -0.23
LIM2-202ENST00000596399 LOC100653049A0A140TA62 436 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 NPIPB13A6NJU9 1138 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 NPIPB4C9JG80 1138 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 KRT34O76011 436 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 SBK2P0C263 348 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 KDELR2P33947 212 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 KLF10Q13118 480 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 TAF11Q15544 211 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 METTL21CQ5VZV1 264 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 Q6ZR03 302 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 FOXL2NBQ6ZUU3 175 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 VTCN1Q7Z7D3 282 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 NRMQ8IXM6 262 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 ALDH16A1Q8IZ83 802 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 OR13C2Q8NGS9 318 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 DVL3Q92997 716 aaPredicted RBP13.58□□□□□ -0.24
LIM2-202ENST00000596399 DUX5Q96PT3 197 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 SH3GL1Q99961 368 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 ALG12Q9BV10 488 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 RBM4Q9BWF3 364 aaKnown RBP13.58□□□□□ -0.24
LIM2-202ENST00000596399 EGLN1Q9GZT9 426 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 MAN2C1Q9NTJ4 1040 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 STX18Q9P2W9 335 aaKnown RBP13.58□□□□□ -0.24
LIM2-202ENST00000596399 EGFL7Q9UHF1 273 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 TANC2Q9HCD6 1990 aa13.58□□□□□ -0.24
LIM2-202ENST00000596399 HMGB1P1B2RPK0 211 aaPredicted RBP13.57□□□□□ -0.24
LIM2-202ENST00000596399 TRAPPC2LH3BP13 241 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 FFAR1O14842 300 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 TIMM8AO60220 97 aaPredicted RBP13.57□□□□□ -0.24
LIM2-202ENST00000596399 IGHV2-70P01814 119 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 IGHMP01871 453 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 ADH4P08319 380 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 THRBP10828 461 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 ERFP50548 548 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 UBA52P62987 128 aaKnown RBP13.57□□□□□ -0.24
LIM2-202ENST00000596399 TNFAIP6P98066 277 aaPredicted RBP13.57□□□□□ -0.24
LIM2-202ENST00000596399 AWAT1Q58HT5 328 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 TBPL2Q6SJ96 375 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 TEX29Q8N6K0 151 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 DEFB108BQ8NET1 73 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 SLC7A6Q92536 515 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 PRRC1Q96M27 445 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 CYSLTR2Q9NS75 346 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 ADAM18Q9Y3Q7 739 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 NPTNQ9Y639 398 aa13.57□□□□□ -0.24
LIM2-202ENST00000596399 IMPA2O14732 288 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 ICMTO60725 284 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 IFNA14P01570 189 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 CD55P08174 381 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 VIMP08670 466 aaKnown RBP13.56□□□□□ -0.24
LIM2-202ENST00000596399 ZNF26P17031 533 aaPredicted RBP13.56□□□□□ -0.24
LIM2-202ENST00000596399 MSR1P21757 451 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 SELENOWP63302 87 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 ST3GAL3Q11203 375 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 CDK5R2Q13319 367 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 MTX3Q5HYI7 312 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 CGB2Q6NT52 195 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 ERICH5Q6P6B1 374 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 BCL6BQ8N143 479 aaPredicted RBP13.56□□□□□ -0.24
LIM2-202ENST00000596399 OR2T12Q8NG77 320 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 OR2Z1Q8NG97 314 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 TAF15Q92804 592 aaKnown RBP eCLIP13.56□□□□□ -0.24
LIM2-202ENST00000596399 SAR1AQ9NR31 198 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 POLE4Q9NR33 117 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 ZDHHC8Q9ULC8 765 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 STARD10Q9Y365 291 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 PCDHGB1Q9Y5G3 927 aa13.56□□□□□ -0.24
LIM2-202ENST00000596399 MGAM2Q2M2H8 2515 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 EFCAB9A8MZ26 197 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 FAM220BPB1ANY3 271 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 CDC42EP2O14613 210 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 ABHD16AO95870 558 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 NR2C1P13056 603 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 GPR4P46093 362 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 ARHGDIAP52565 204 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 PCBD1P61457 104 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 PRKCDQ05655 676 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 SLC3A1Q07837 685 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 KLF17Q5JT82 389 aaPredicted RBP13.55□□□□□ -0.24
LIM2-202ENST00000596399 C1orf94Q6P1W5 598 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms