RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 TIMM10BQ9Y5J6 103 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 GMEB1Q9Y692 573 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 VWFP04275 2813 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 CLPSL1A2RUU4 121 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 TRAPPC13A5PLN9 417 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 CPSF4LA6NMK7 179 aaKnown RBP11.21□□□□□ -0.61
COPS3-218ENST00000584216 CEACAM18A8MTB9 384 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 M0R3H8 397 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 TRMUO75648 421 aaKnown RBP11.21□□□□□ -0.61
COPS3-218ENST00000584216 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.61
COPS3-218ENST00000584216 GNB2P62879 340 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 PSG4Q00888 419 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 NPTX1Q15818 432 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 TMEM255AQ5JRV8 349 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 GPR157Q5UAW9 335 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 FAM27BQ5VT28 67 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 NLRC3Q7RTR2 1065 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 SMYD1Q8NB12 490 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 FNDC8Q8TC99 324 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 RAB40AQ8WXH6 277 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 ASB10Q8WXI3 467 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 TAF15Q92804 592 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPS3-218ENST00000584216 NABP1Q96AH0 204 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 COG8Q96MW5 612 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 OR2H1Q9GZK4 316 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 INIPQ9NRY2 104 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 DCAF16Q9NXF7 216 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 SLC25A37Q9NYZ2 338 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 MIOXQ9UGB7 285 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 NDRG4Q9ULP0 352 aaKnown RBP11.21□□□□□ -0.61
COPS3-218ENST00000584216 SLC7A7Q9UM01 511 aa11.21□□□□□ -0.61
COPS3-218ENST00000584216 NPIPB13A6NJU9 1138 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 NPIPB4C9JG80 1138 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 SNNO75324 88 aaPredicted RBP11.2□□□□□ -0.62
COPS3-218ENST00000584216 ERLIN1O75477 346 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 SLC2A10O95528 541 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 ABHD16AO95870 558 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 F13BP05160 661 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 CST2P09228 141 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 WNT2P09544 360 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 CDAP32320 146 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 UGT2B15P54855 530 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 ERVK-25P63136 954 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 RPL18Q07020 188 aaKnown RBP11.2□□□□□ -0.62
COPS3-218ENST00000584216 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
COPS3-218ENST00000584216 CD47Q08722 323 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 PSG7Q13046 419 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 DEFB112Q30KQ8 113 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 TTMPQ5BVD1 217 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 SLC27A4Q6P1M0 643 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 FIP1L1Q6UN15 594 aaKnown RBP11.2□□□□□ -0.62
COPS3-218ENST00000584216 JAZF1Q86VZ6 243 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 C11orf65Q8NCR3 313 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 OR6T1Q8NGN1 323 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 OR10S1Q8NGN2 331 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 FAM71F1Q96KD3 344 aaPredicted RBP11.2□□□□□ -0.62
COPS3-218ENST00000584216 SIGLEC11Q96RL6 698 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 RBM4BQ9BQ04 359 aaKnown RBP11.2□□□□□ -0.62
COPS3-218ENST00000584216 WFDC6Q9BQY6 131 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 ZNF426Q9BUY5 554 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 C1RLQ9NZP8 487 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 POMT1Q9Y6A1 747 aa11.2□□□□□ -0.62
COPS3-218ENST00000584216 MDFIC2A0A1B0GVS7 189 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 GPX2P18283 190 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 CD247P20963 164 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 KITLGP21583 273 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 MRPL19P49406 292 aaKnown RBP11.19□□□□□ -0.62
COPS3-218ENST00000584216 VSNL1P62760 191 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 PAX2Q02962 417 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 HLXQ14774 488 aaPredicted RBP11.19□□□□□ -0.62
COPS3-218ENST00000584216 TAF9Q16594 264 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 SYT9Q86SS6 491 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 PTOV1Q86YD1 416 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 KLBQ86Z14 1044 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 MSRB3Q8IXL7 192 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 OR8B3Q8NGG8 313 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 AENQ8WTP8 325 aaKnown RBP11.19□□□□□ -0.62
COPS3-218ENST00000584216 ITLN1Q8WWA0 313 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 NSMAFQ92636 917 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 NEIL1Q96FI4 390 aaPredicted RBP11.19□□□□□ -0.62
COPS3-218ENST00000584216 RBP7Q96R05 134 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 OR2V2Q96R30 315 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 OR8B2Q96RD0 313 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 WACQ9BTA9 647 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 WNT5BQ9H1J7 359 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 CENPHQ9H3R5 247 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 TBCCD1Q9NVR7 557 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 VAPAQ9P0L0 249 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 UGT2A1Q9Y4X1 527 aa11.19□□□□□ -0.62
COPS3-218ENST00000584216 KIR2DS1A0A191URI9 304 aa11.18□□□□□ -0.62
COPS3-218ENST00000584216 SLC22A31A6NKX4 558 aa11.18□□□□□ -0.62
COPS3-218ENST00000584216 LRRC30A6NM36 301 aa11.18□□□□□ -0.62
COPS3-218ENST00000584216 C12orf71A8MTZ7 269 aa11.18□□□□□ -0.62
COPS3-218ENST00000584216 FSTL3O95633 263 aa11.18□□□□□ -0.62
COPS3-218ENST00000584216 IGF2P01344 180 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms