RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 ENDOGQ14249 297 aaKnown RBP7.56□□□□□ -1.2
GGA3-207ENST00000578896 TAF11Q15544 211 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 MOGQ16653 247 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 FAM27BQ5VT28 67 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 METTL21CQ5VZV1 264 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 C1orf94Q6P1W5 598 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 HDXQ7Z353 690 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 C1QL2Q7Z5L3 287 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 OR4M2Q8NGB6 313 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 OR13C2Q8NGS9 318 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 LIPHQ8WWY8 451 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 SLC7A6Q92536 515 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 TAF15Q92804 592 aaKnown RBP eCLIP7.56□□□□□ -1.2
GGA3-207ENST00000578896 RCN3Q96D15 328 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 RAB39BQ96DA2 213 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 TIMD4Q96H15 378 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 C4orf45Q96LM5 186 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 SH3GL1Q99961 368 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 ALG12Q9BV10 488 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 MMP26Q9NRE1 261 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 MAN2C1Q9NTJ4 1040 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 FGFR1OP2Q9NVK5 253 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 CMTM6Q9NX76 183 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 ARMCX1Q9P291 453 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 EGFL7Q9UHF1 273 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 PPIAL4AQ9Y536 164 aa7.56□□□□□ -1.2
GGA3-207ENST00000578896 A0A0A6YYJ9 748 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 IGHV3-64DA0A0J9YX35 117 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 TMEM89A2RUT3 159 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 EFCAB9A8MZ26 197 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 FAM220BPB1ANY3 271 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 TRIM77I1YAP6 450 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 TIMM8AO60220 97 aaPredicted RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 ZNF205O95201 554 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 IFNA14P01570 189 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 CST2P09228 141 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 ANPEPP15144 967 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 ZNF26P17031 533 aaPredicted RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 EGR1P18146 543 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 SEC61A1P61619 476 aaKnown RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 SELENOWP63302 87 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 TNFAIP6P98066 277 aaPredicted RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 ST3GAL3Q11203 375 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 MBNL2Q5VZF2 373 aaKnown RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 ERICH5Q6P6B1 374 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 Q6ZR03 302 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 HDDC2Q7Z4H3 204 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 OAFQ86UD1 273 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 ALDH16A1Q8IZ83 802 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 BCL6BQ8N143 479 aaPredicted RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 C3orf56Q8N813 242 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 ZDHHC22Q8N966 263 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 OR2T12Q8NG77 320 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 CMBLQ96DG6 245 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 PRRC1Q96M27 445 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 Q96M85 177 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 FNDC11Q9BVV2 318 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 RERGLQ9H628 205 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 SMURF2Q9HAU4 748 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 POLE4Q9NR33 117 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 STX18Q9P2W9 335 aaKnown RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 KLHL21Q9UJP4 597 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 STARD10Q9Y365 291 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 ADAM18Q9Y3Q7 739 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 TIMM10BQ9Y5J6 103 aa7.55□□□□□ -1.2
GGA3-207ENST00000578896 SOX21Q9Y651 276 aaPredicted RBP7.55□□□□□ -1.2
GGA3-207ENST00000578896 IGHV3OR16-10A0A075B7F0 116 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 A0A087WUU8 490 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 ELOVL7A1L3X0 281 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 TRAPPC2LH3BP13 241 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 CDC42EP2O14613 210 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 WIPF1O43516 503 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 PRSS23O95084 383 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 ZNF682O95780 498 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 ABHD16AO95870 558 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 GPANK1O95872 356 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 IGF2P01344 180 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 IGHMP01871 453 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 DBHP09172 617 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 THRBP10828 461 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 MSR1P21757 451 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 RPL4P36578 427 aaKnown RBP7.54□□□□□ -1.2
GGA3-207ENST00000578896 HTR5AP47898 357 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 SLC9A3P48764 834 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 PRSS12P56730 875 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 PRKCDQ05655 676 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 MESTQ5EB52 335 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 MTX3Q5HYI7 312 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 FAM209AQ5JX71 171 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 ZNF730Q6ZMV8 503 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 FOXL2NBQ6ZUU3 175 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.54□□□□□ -1.2
GGA3-207ENST00000578896 JAZF1Q86VZ6 243 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 OR5AS1Q8N127 324 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 OR2Z1Q8NG97 314 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 NANPQ8TBE9 248 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 ZFAND2BQ8WV99 257 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 ITLN1Q8WWA0 313 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms