RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 C16orf45Q96MC5 204 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 OR8B2Q96RD0 313 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 WFDC6Q9BQY6 131 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 TMEM246Q9BRR3 403 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 ELOVL3Q9HB03 270 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 NANSQ9NR45 359 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 ACOXLQ9NUZ1 547 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 CLN8Q9UBY8 286 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 CENPVL3A0A0U1RRI6 287 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZNF816-ZNF321PA0A0X1KG74 233 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 SLC2A10O95528 541 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 HIST1H2ABP04908 130 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 IL6P05231 212 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 MRPS34P82930 218 aaKnown RBP13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 EGR3Q06889 387 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZNF74Q16587 644 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 C6orf10Q5SRN2 563 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 OGFOD2Q6N063 350 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 DHRS4L2Q6PKH6 230 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 HIST3H2AQ7L7L0 130 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 ATG16L2Q8NAA4 619 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 NOXO1Q8NFA2 376 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 NFKBIDQ8NI38 313 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 SGCDQ92629 289 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 NSMAFQ92636 917 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 HIST1H2ACQ93077 130 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 WNT5BQ9H1J7 359 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 C16orf95Q9H693 158 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 SLC13A4Q9UKG4 626 aa13.53□□□□□ -0.24
CTDNEP1-211ENST00000575783 IGHV3-64DA0A0J9YX35 117 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 MCIDASD6RGH6 385 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 BLOC1S5-TXNDC5H3BN57 136 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 KPNA4O00629 521 aaPredicted RBP13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 SERPINE1P05121 402 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 UMPSP11172 480 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 GSTM3P21266 225 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 IER3P46695 156 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 OXLD1Q5BKU9 147 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 ARL9Q6T311 187 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 GDPGP1Q6ZNW5 385 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 VASH1Q7L8A9 365 aaPredicted RBP13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 KRT73Q86Y46 540 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 PPP1R14AQ96A00 147 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 CMBLQ96DG6 245 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 ITCHQ96J02 903 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 ZNF607Q96SK3 696 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 SPATA5L1Q9BVQ7 753 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 MRPL13Q9BYD1 178 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 TRIM15Q9C019 465 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 POFUT1Q9H488 388 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 RMND5AQ9H871 391 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 MEAF6Q9HAF1 191 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 PNPOQ9NVS9 261 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 TANC2Q9HCD6 1990 aa13.52□□□□□ -0.25
CTDNEP1-211ENST00000575783 A0A0U1RQK1 487 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 IFNL4K9M1U5 179 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 P2RY10O00398 339 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 TRMUO75648 421 aaKnown RBP13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 SLC22A3O75751 556 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 TOX4O94842 621 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 ABHD16AO95870 558 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 F13BP05160 661 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 CFHR2P36980 270 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 FAM201AQ5SY85 155 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 C10orf128Q5T292 105 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 SWT1Q5T5J6 900 aaKnown RBP13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 HHATQ5VTY9 493 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 WDR25Q64LD2 544 aaPredicted RBP13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 DHRS7BQ6IAN0 325 aaPredicted RBP13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 LYPD2Q6UXB3 125 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 RANBP3LQ86VV4 465 aaPredicted RBP13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 ANP32BQ92688 251 aaKnown RBP13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 MAGEB18Q96M61 343 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 SORT1Q99523 831 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 UGT2A1Q9Y4X1 527 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 TIMM10BQ9Y5J6 103 aa13.51□□□□□ -0.25
CTDNEP1-211ENST00000575783 COL7A1Q02388 2944 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 A0A1W2PRG6 482 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 C22orf46C9J442 243 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 CLIC1O00299 241 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 ICMTO60725 284 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 FMO6PO60774 539 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 ACADSP16219 412 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 LAP3P28838 519 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 ETV4P43268 484 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 SLC1A6P48664 564 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 ZNF404Q494X3 552 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 TTC33Q6PID6 262 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 LINC00114Q6XXX2 140 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 Q6ZTK2 550 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 NANOGNBQ7Z5D8 188 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 PTOV1Q86YD1 416 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 PDZD9Q8IXQ8 264 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 OR5AS1Q8N127 324 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 C11orf44Q8N8P7 122 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms