RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 FGF12P61328 243 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 CDK6Q00534 326 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 TAF11Q15544 211 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 C10orf128Q5T292 105 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 ZNF620Q6ZNG0 422 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 HIST3H2AQ7L7L0 130 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 C1orf174Q8IYL3 243 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 NSMAFQ92636 917 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 HIST1H2ACQ93077 130 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 C4orf45Q96LM5 186 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 SEPHS2Q99611 448 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 NUDT16L1Q9BRJ7 211 aaKnown RBP13.86□□□□□ -0.19
HERC1-207ENST00000560316 SLCO1B3Q9NPD5 702 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.86□□□□□ -0.19
HERC1-207ENST00000560316 ZNF229Q9UJW7 825 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 PRORSD1PA6NEY8 169 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 CPSF4LA6NMK7 179 aaKnown RBP13.85□□□□□ -0.19
HERC1-207ENST00000560316 PIN1P1O15428 100 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 CHP2O43745 196 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ERLIN1O75477 346 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 THY1P04216 161 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 F13BP05160 661 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ASAH2BP0C7U1 165 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ACADSP16219 412 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 HOXB9P17482 250 aaPredicted RBP13.85□□□□□ -0.19
HERC1-207ENST00000560316 MMP16P51512 607 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ARHGDIAP52565 204 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ZNF133P52736 654 aaPredicted RBP13.85□□□□□ -0.19
HERC1-207ENST00000560316 FMODQ06828 376 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 BST1Q10588 318 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 BEAN1Q3B7T3 259 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 RUNDC3AQ59EK9 446 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 GPR157Q5UAW9 335 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 SLC27A4Q6P1M0 643 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ZNF613Q6PF04 617 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 TTC33Q6PID6 262 aaPredicted RBP13.85□□□□□ -0.19
HERC1-207ENST00000560316 NANOGNBQ7Z5D8 188 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ZER1Q7Z7L7 766 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 TMEM86BQ8N661 226 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ZNF420Q8TAQ5 688 aaPredicted RBP13.85□□□□□ -0.19
HERC1-207ENST00000560316 ASB10Q8WXI3 467 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 OR2V2Q96R30 315 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ROPN1BQ9BZX4 212 aaPredicted RBP13.85□□□□□ -0.19
HERC1-207ENST00000560316 OR2H1Q9GZK4 316 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ROPN1Q9HAT0 212 aaPredicted RBP13.85□□□□□ -0.19
HERC1-207ENST00000560316 ELOVL3Q9HB03 270 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 TMEM165Q9HC07 324 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 GCM1Q9NP62 436 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 SLC25A37Q9NYZ2 338 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 ZIM2Q9NZV7 527 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 IL19Q9UHD0 177 aa13.85□□□□□ -0.19
HERC1-207ENST00000560316 A0A1W2PRG6 482 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 C3orf80F5H4A9 247 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 H0YL77 283 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 ICMTO60725 284 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 LYPD3O95274 346 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 CYB5R3P00387 301 aaPredicted RBP13.84□□□□□ -0.19
HERC1-207ENST00000560316 KITP10721 976 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 UGT2B15P54855 530 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 NPTX1Q15818 432 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 LCE2DQ5TA82 110 aaPredicted RBP13.84□□□□□ -0.19
HERC1-207ENST00000560316 ARMC8Q8IUR7 673 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 MSRB3Q8IXL7 192 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 FITM2Q8N6M3 262 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 SMYD1Q8NB12 490 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 FAM71F1Q96KD3 344 aaPredicted RBP13.84□□□□□ -0.19
HERC1-207ENST00000560316 ZNF607Q96SK3 696 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 SDR39U1Q9NRG7 319 aaPredicted RBP13.84□□□□□ -0.19
HERC1-207ENST00000560316 MAN2C1Q9NTJ4 1040 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 MIOXQ9UGB7 285 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 POMT1Q9Y6A1 747 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 DOCK11Q5JSL3 2073 aa13.84□□□□□ -0.19
HERC1-207ENST00000560316 TRPC5OSA6NMA1 111 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 HDAC3O15379 428 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 GPR137BO60478 399 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 FMO6PO60774 539 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 RPL18Q07020 188 aaKnown RBP13.83□□□□□ -0.2
HERC1-207ENST00000560316 SCARB2Q14108 478 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 C2orf68Q2NKX9 166 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 ENTPD8Q5MY95 495 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 ALDH16A1Q8IZ83 802 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 GOLGA6L1Q8N7Z2 621 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 SSMEM1Q8WWF3 244 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 DYRK2Q92630 601 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 NMD3Q96D46 503 aaKnown RBP13.83□□□□□ -0.2
HERC1-207ENST00000560316 NEIL1Q96FI4 390 aaPredicted RBP13.83□□□□□ -0.2
HERC1-207ENST00000560316 PLEKHA8Q96JA3 519 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 TMEM246Q9BRR3 403 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 PCGF1Q9BSM1 259 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 CDADC1Q9BWV3 514 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 SLAMF8Q9P0V8 285 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 SLC7A7Q9UM01 511 aa13.83□□□□□ -0.2
HERC1-207ENST00000560316 CENPBD1B2RD01 187 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 SURF4O15260 269 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 SERPINB7O75635 380 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 ABHD16AO95870 558 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 SFTPBP07988 381 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 GSTM3P21266 225 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 KITLGP21583 273 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 CPT2P23786 658 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms