RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZNF417Q8TAU3 575 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 CPT1CQ8TCG5 803 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 RELTQ969Z4 430 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
SCARB1-204ENST00000535005 DNAJA3Q96EY1 480 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF587Q96SQ5 575 aaPredicted RBP10.95□□□□□ -0.66
SCARB1-204ENST00000535005 HDHD5Q9BXW7 423 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 NARFLQ9H6Q4 476 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF275Q9NSD4 429 aaPredicted RBP10.95□□□□□ -0.66
SCARB1-204ENST00000535005 ASB6Q9NWX5 421 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 TAS2R5Q9NYW4 299 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 EMC3Q9P0I2 261 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 SLC23A1Q9UHI7 598 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF835Q9Y2P0 537 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF175Q9Y473 711 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 CFAP46Q8IYW2 2715 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 SMAD9O15198 467 aaKnown RBP10.95□□□□□ -0.66
SCARB1-204ENST00000535005 AKR7A2O43488 359 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 AKR7A3O95154 331 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 VAMP5O95183 116 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 HLA-DPB1P04440 258 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 ANXA3P12429 323 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 C4BPBP20851 252 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 SLC6A1P30531 599 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 PTGER4P35408 488 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 FXYD6P3P58550 94 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 PRPS1P60891 318 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 MXD1Q05195 221 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 C3AR1Q16581 482 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 EMC4Q5J8M3 183 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 SMARCD3Q6STE5 483 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 GFRALQ6UXV0 394 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 CHMP1BQ7LBR1 199 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 TMEM99Q8N816 258 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 GALNT11Q8NCW6 608 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 OR51A7Q8NH64 312 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 OTULINQ96BN8 352 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF845Q96IR2 970 aaPredicted RBP10.95□□□□□ -0.66
SCARB1-204ENST00000535005 OR2M2Q96R28 347 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 MED28Q9H204 178 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 MCCC2Q9HCC0 563 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 COPZ2Q9P299 210 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 NLKQ9UBE8 527 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 RASD1Q9Y272 281 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 FKBP7Q9Y680 259 aa10.95□□□□□ -0.66
SCARB1-204ENST00000535005 COL6A6A6NMZ7 2263 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 SVILO95425 2214 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 TRAV27A0A087WT01 109 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 A0A1W2PNV4 684 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF814B7Z6K7 855 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 MS4A18H0YCH9 400 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 CASKO14936 926 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 PRODHO43272 600 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 WDR1O75083 606 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 NDUFB2O95178 105 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 SYNGR4O95473 234 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 HOXD4P09016 255 aaPredicted RBP10.94□□□□□ -0.66
SCARB1-204ENST00000535005 CLEC2LP0C7M8 214 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 GABRA1P14867 456 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 STOMP27105 288 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 APEX1P27695 318 aaKnown RBP10.94□□□□□ -0.66
SCARB1-204ENST00000535005 HSF2Q03933 536 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 RBPJQ06330 500 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 IL18Q14116 193 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 MS4A18Q3C1V0 323 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 FAM122CQ6P4D5 195 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 NHLRC1Q6VVB1 395 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 TCEANCQ8N8B7 351 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 LRRC75AQ8NAA5 344 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 ST6GALNAC3Q8NDV1 305 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 LHFPL5Q8TAF8 219 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF431Q8TF32 576 aaPredicted RBP10.94□□□□□ -0.66
SCARB1-204ENST00000535005 GPX7Q96SL4 187 aaPredicted RBP10.94□□□□□ -0.66
SCARB1-204ENST00000535005 ATF6BQ99941 703 aa10.94□□□□□ -0.66
SCARB1-204ENST00000535005 SF3B5Q9BWJ5 86 aaKnown RBP10.94□□□□□ -0.66
SCARB1-204ENST00000535005 MCTS1Q9ULC4 181 aaKnown RBP10.94□□□□□ -0.66
SCARB1-204ENST00000535005 BLOC1S5-TXNDC5H3BN57 136 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 H3BN98 237 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 CYTIPO60759 359 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 OR6A2O95222 327 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 AQP2P41181 271 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ETV1P50549 477 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 SMSP52788 366 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 EFNB1P98172 346 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 BDH1Q02338 343 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 RPL18Q07020 188 aaKnown RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 PUDPQ08623 228 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 POU4F3Q15319 338 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 PLA1AQ53H76 456 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 FAM205BPQ63HN1 556 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 GPR139Q6DWJ6 353 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ABLIM2Q6H8Q1 611 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 OR4M2Q8NGB6 313 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 OR5M9Q8NGP3 310 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 MOSPD2Q8NHP6 518 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 FANK1Q8TC84 345 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF582Q96NG8 517 aaPredicted RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 OXGR1Q96P68 337 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms