RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 SMIM19Q96E16 107 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 BCL7BQ9BQE9 202 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 MROQ9BYG7 248 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 CRLF2Q9HC73 371 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 LRP12Q9Y561 859 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 TRDV1A0A1B0GX56 115 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 VAMP5O95183 116 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 TGM6O95932 706 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 SLC2A1P11166 492 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 UGT2B10P36537 528 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 HIST3H3Q16695 136 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 FAM205BPQ63HN1 556 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 CD200R1LQ6Q8B3 271 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 CPNE4Q96A23 557 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-219ENST00000491128 NKX3-1Q99801 234 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-219ENST00000491128 ULBP2Q9BZM5 246 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 ZNF71Q9NQZ8 489 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-219ENST00000491128 UGT2A1Q9Y4X1 527 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 LHFPL6Q9Y693 200 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 TRAV17A0A0B4J275 112 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 LOC102725191A0A1B0GVB3 256 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 CEACAM4O75871 244 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 RGS9O75916 674 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-219ENST00000491128 BDH1Q02338 343 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 ST7LQ8TDW4 575 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 SLC7A6Q92536 515 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 OR8B4Q96RC9 309 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 TTYH2Q9BSA4 534 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 ZNF416Q9BWM5 594 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 TIGARQ9NQ88 270 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 RAXQ9Y2V3 346 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 EMC9Q9Y3B6 208 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 FREM1Q5H8C1 2179 aa12.31□□□□□ -0.44
SMPD4-219ENST00000491128 OGG1O15527 345 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 RGS5O15539 181 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-219ENST00000491128 SH3BGRP55822 239 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-219ENST00000491128 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 WDR38Q5JTN6 314 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 RPL22L1Q6P5R6 122 aaKnown RBP12.3□□□□□ -0.44
SMPD4-219ENST00000491128 ZADH2Q8N4Q0 377 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 OR52N5Q8NH56 324 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 ZDHHC11Q9H8X9 412 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 CYB5R1Q9UHQ9 305 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 MSRB2Q9Y3D2 182 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 TMEM14AQ9Y6G1 99 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 hCG_2014768A0A024R1R8 64 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 A6NIN4 97 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 TUBA1BP68363 451 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 ABLIM2Q6H8Q1 611 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 TUBA1AQ71U36 451 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 ZNF679Q8IYX0 411 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 OR2G2Q8NGZ5 317 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 ABHD17AQ96GS6 310 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 WDYHV1Q96HA8 205 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 SLC25A18Q9H1K4 315 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 ACKR4Q9NPB9 350 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 B3GAT2Q9NPZ5 323 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 FOXD3Q9UJU5 478 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-219ENST00000491128 GSTK1Q9Y2Q3 226 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 DOCK7Q96N67 2140 aa12.3□□□□□ -0.44
SMPD4-219ENST00000491128 CYTIPO60759 359 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 TACSTD2P09758 323 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 BMP4P12644 408 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 B4GALT1P15291 398 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 KIR3DL2P43630 455 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 PRKXP51817 358 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 TAS2R43P59537 309 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 GALK2Q01415 458 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 EGR3Q06889 387 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 POU4F3Q15319 338 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 CHMP1BQ7LBR1 199 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 GCNT2Q8N0V5 402 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 SLAMF6Q96DU3 332 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 C12orf49Q9H741 205 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 POLE4Q9NR33 117 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 RHBDL2Q9NX52 303 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 GDF2Q9UK05 429 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-219ENST00000491128 NOSIPQ9Y314 301 aaKnown RBP12.29□□□□□ -0.44
SMPD4-219ENST00000491128 DHHO43323 396 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 ALKBH1Q13686 389 aaKnown RBP12.29□□□□□ -0.44
SMPD4-219ENST00000491128 ZMAT1Q5H9K5 638 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 PDSS1Q5T2R2 415 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 TSPO2Q5TGU0 170 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 GDPGP1Q6ZNW5 385 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 ZNF676Q8N7Q3 588 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 DTX3Q8N9I9 347 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 OR5AK2Q8NH90 309 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 TMEM54Q969K7 222 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 KLHL9Q9P2J3 617 aa12.29□□□□□ -0.44
SMPD4-219ENST00000491128 TLN1Q9Y490 2541 aaKnown RBP12.29□□□□□ -0.44
SMPD4-219ENST00000491128 SYNGR4O95473 234 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 INHBBP09529 407 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 FGF9P31371 208 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 NAA40Q86UY6 237 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 C20orf196Q8IYI0 205 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms