RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 KLRB1Q12918 225 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 MEP1BQ16820 701 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 TSPO2Q5TGU0 170 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 KLBQ86Z14 1044 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 MCEMP1Q8IX19 187 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 OR10H5Q8NGA6 315 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 FAM57AQ8TBR7 257 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 APH1AQ96BI3 265 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 C12orf43Q96C57 262 aaKnown RBP11.31□□□□□ -0.6
TOP3A-206ENST00000489131 BOD1Q96IK1 185 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 AMELYQ99218 206 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 SLC25A18Q9H1K4 315 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 SIAEQ9HAT2 523 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 GPR35Q9HC97 309 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 ATMQ13315 3056 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 A0A1W2PPL8 197 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 FIGNL2A6NMB9 653 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 J3QLW9 94 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 SLC22A1O15245 554 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 KRT8P05787 483 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 CST2P09228 141 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF19P17023 458 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 CTSSP25774 331 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 FGF9P31371 208 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 OPRL1P41146 370 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 GUCA1AP43080 201 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 CRYBB2P43320 205 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 GBX2P52951 348 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 SIRPAP78324 504 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 AQP6Q13520 282 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 ENDOGQ14249 297 aaKnown RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 CDK5R1Q15078 307 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 TRAM1Q15629 374 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 TP53I3Q53FA7 332 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 RPL22L1Q6P5R6 122 aaKnown RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 FAM214BQ7L5A3 538 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 ABHD12BQ7Z5M8 362 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 SYT9Q86SS6 491 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 WBP1Q96G27 269 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 MAP6Q96JE9 813 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 PGLYRP3Q96LB9 341 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 TRIB1Q96RU8 372 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 NAA50Q9GZZ1 169 aaKnown RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 C1orf198Q9H425 327 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 SLC7A10Q9NS82 523 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 DDX28Q9NUL7 540 aaKnown RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 ACOXLQ9NUZ1 547 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-206ENST00000489131 LAMA5O15230 3695 aa11.3□□□□□ -0.6
TOP3A-206ENST00000489131 E9PI62 339 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 ERVH48-1M5A8F1 160 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 GPRIN2O60269 458 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 NOL3O60936 208 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 SRSF10O75494 262 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 SC5DO75845 299 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 GADD45AP24522 165 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 EDNRAP25101 427 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 CDAP32320 146 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 TIMP3P35625 211 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 RPS27P42677 84 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 CCR9P51686 369 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 SH3BGRP55822 239 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 ROR2Q01974 943 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 EIF2B1Q14232 305 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 CNPY1Q3B7I2 92 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 LIPNQ5VXI9 398 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 FBXW9Q5XUX1 488 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 RTL6Q6ICC9 239 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 PLXDC2Q6UX71 529 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 SEM1Q6ZVN7 128 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 NUFIP2Q7Z417 695 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 FAM220AQ7Z4H9 259 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 DCXRQ7Z4W1 244 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 CISD2Q8N5K1 135 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 TEX19Q8NA77 164 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 OR6K3Q8NGY3 331 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 THEM6Q8WUY1 208 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF775Q96BV0 537 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF837Q96EG3 531 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 FOXN4Q96NZ1 517 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 ALKBH3Q96Q83 286 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 FOXB1Q99853 325 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 MROQ9BYG7 248 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 NIPAL2Q9H841 368 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 SEC61A2Q9H9S3 476 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 PNRC2Q9NPJ4 139 aaKnown RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 SLCO1C1Q9NYB5 712 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 LUZP4Q9P127 313 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 GDF2Q9UK05 429 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-206ENST00000489131 GNG8Q9UK08 70 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 STUB1Q9UNE7 303 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 FAM215AQ9Y5M1 114 aa11.29□□□□□ -0.6
TOP3A-206ENST00000489131 TRDV1A0A1B0GX56 115 aa11.28□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF878C9JN71 531 aa11.28□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF587BE7ETH6 402 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms