RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.95□□□□□ -0.5
HMGN1-216ENST00000486741 CSNK2A3Q8NEV1 391 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 IL17RDQ8NFM7 739 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 TOMM40LQ969M1 308 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 ABHD1Q96SE0 405 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 STEAP1Q9UHE8 339 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 SLC43A1O75387 559 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 DCTDP32321 178 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 CDC20Q12834 499 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 SLC17A1Q14916 467 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 BEX5Q5H9J7 111 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 OVCH1Q7RTY7 1134 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 C9orf40Q8IXQ3 194 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 SLC43A2Q8N370 569 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 PSD2Q9BQI7 771 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 LSM2Q9Y333 95 aaKnown RBP11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ALG1L2C9J202 215 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 TNFRSF10AO00220 468 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 PDGFBP01127 241 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ADRA2AP08913 450 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 BDKRB2P30411 391 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 AAED1Q7RTV5 226 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 LSMEM1Q8N8F7 131 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 HAVCR2Q8TDQ0 301 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 SPTSSAQ969W0 71 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 SLAMF6Q96DU3 332 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 SEC22AQ96IW7 307 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ARPC5LQ9BPX5 153 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF442Q9H7R0 627 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 SLC7A11Q9UPY5 501 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 FAM166BA8MTA8 275 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 TEX46H3BTG2 121 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 CALCBP10092 127 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 TMEM81Q6P7N7 255 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 IDO2Q6ZQW0 420 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 RAB11FIP2Q7L804 512 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 PIGTQ969N2 578 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 MAB21L2Q9Y586 359 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 MDC1Q14676 2089 aaKnown RBP11.94□□□□□ -0.5
HMGN1-216ENST00000486741 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 AIPO00170 330 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 CSF1P09603 554 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 FXYD4P59646 89 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 SLC35A1P78382 337 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 MYBPHQ13203 477 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF79Q15937 498 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ANKRD37Q7Z713 158 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ATG4DQ86TL0 474 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-216ENST00000486741 ANGPTL5Q86XS5 388 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 KMT5CQ86Y97 462 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 OR10AC1Q8NH08 325 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 APOBEC4Q8WW27 367 aaKnown RBP11.94□□□□□ -0.5
HMGN1-216ENST00000486741 NXT1Q9UKK6 140 aaKnown RBP11.94□□□□□ -0.5
HMGN1-216ENST00000486741 V9GYH0 126 aa11.94□□□□□ -0.5
HMGN1-216ENST00000486741 TMEM235A6NFC5 223 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 CD34P28906 385 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 CARD18P57730 90 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 POU4F3Q15319 338 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-216ENST00000486741 TCEAL6Q6IPX3 200 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 Q6ZTK2 550 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF454Q8N9F8 522 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 OR51S1Q8NGJ8 323 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 TCEAL3Q969E4 200 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 KCNK15Q9H427 330 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 CYSLTR2Q9NS75 346 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 PARPBPQ9NWS1 579 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 GJE1A6NN92 205 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 POM121CA8CG34 1229 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-216ENST00000486741 WRBO00258 174 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 DDAH2O95865 285 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 TAS2R20P59543 309 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 GUCA2AQ02747 115 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 MGAT2Q10469 447 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 C5orf46Q6UWT4 87 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 RFPL4BQ6ZWI9 263 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
HMGN1-216ENST00000486741 HRH3Q9Y5N1 445 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 SCN8AQ9UQD0 1980 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 OR14I1A6ND48 311 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 SPDEFO95238 335 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 IGHA1P01876 353 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 SERPINA5P05154 406 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF93P35789 620 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-216ENST00000486741 PI4KAP42356 2102 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 CBX5P45973 191 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 HTR5AP47898 357 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 SKP2Q13309 424 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 INPP5JQ15735 1006 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-216ENST00000486741 C2orf76Q3KRA6 126 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 EMC4Q5J8M3 183 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 WDR38Q5JTN6 314 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 TRAPPC6BQ86SZ2 158 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 UBALD2Q8IYN6 164 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 OR10K1Q8NGX5 313 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 PIGCQ92535 297 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 THOC3Q96J01 351 aaKnown RBP11.93□□□□□ -0.5
HMGN1-216ENST00000486741 MRI1Q9BV20 369 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms