RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SGCAQ16586 387 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 C2orf68Q2NKX9 166 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 C10orf128Q5T292 105 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 GPR157Q5UAW9 335 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC27A4Q6P1M0 643 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 OR9I1Q8NGQ6 314 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF420Q8TAQ5 688 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 SSMEM1Q8WWF3 244 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 ASB10Q8WXI3 467 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 DYRK2Q92630 601 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 FAM71F1Q96KD3 344 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 OR2V2Q96R30 315 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 TMEM246Q9BRR3 403 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 PCGF1Q9BSM1 259 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 OR2H1Q9GZK4 316 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 PAIP1Q9H074 479 aaKnown RBP9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 KCNN2Q9H2S1 579 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 GCM1Q9NP62 436 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 IL19Q9UHD0 177 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 PLXNB1O43157 2135 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 C5orf63A6NC05 138 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 M0R3H8 397 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 TNFRSF13BO14836 293 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 TRMUO75648 421 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 F13BP05160 661 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 CSF1P09603 554 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 ASAH2BP0C7U1 165 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 VSIG8P0DPA2 414 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 ACADSP16219 412 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 TNFSF4P23510 183 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 AQP1P29972 269 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 PITPNBP48739 271 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF133P52736 654 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 PCBP3P57721 371 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 RPL15P61313 204 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 FADDQ13158 208 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 TAF11Q15544 211 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 NPTX1Q15818 432 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 FAM201AQ5SY85 155 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 HHATQ5VTY9 493 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 REEP3Q6NUK4 255 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC2A7Q6PXP3 512 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 LYPD2Q6UXB3 125 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 UNQ6126/PRO20091Q6UXV3 157 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 Q6ZSV7 163 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 TSPYL5Q86VY4 417 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 C10orf82Q8WW14 230 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 NSMAFQ92636 917 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 ANP32BQ92688 251 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 GTF2H4Q92759 462 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 NMD3Q96D46 503 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 NEIL1Q96FI4 390 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 C4orf45Q96LM5 186 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF607Q96SK3 696 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 MCHR1Q99705 422 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 RMND5AQ9H871 391 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 SLCO1B3Q9NPD5 702 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 NANSQ9NR45 359 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC25A37Q9NYZ2 338 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 MIOXQ9UGB7 285 aa9.04□□□□□ -0.96
SMARCC1-205ENST00000483847 IGHV3-64DA0A0J9YX35 117 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 CENPVL3A0A0U1RRI6 287 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 CPSF4LA6NMK7 179 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 C22orf46C9J442 243 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 BLOC1S5-TXNDC5H3BN57 136 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 BIRC5O15392 142 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 CHP2O43745 196 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 UMPSP11172 480 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 KITLGP21583 273 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 LAP3P28838 519 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 UGT2B15P54855 530 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 BPIFB3P59826 476 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 CDK6Q00534 326 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 RPL18Q07020 188 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 TTMPQ5BVD1 217 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 GCNT6Q5T4J0 391 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 FAM27BQ5VT28 67 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 MSANTD1Q6ZTZ1 278 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 NANOGNBQ7Z5D8 188 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 ZER1Q7Z7L7 766 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 RANBP3LQ86VV4 465 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 KRT73Q86Y46 540 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 MSRB3Q8IXL7 192 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 ZSCAN4Q8NAM6 433 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 TBC1D15Q8TC07 691 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 MRAPQ8TCY5 172 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 HDAC2Q92769 488 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 CMBLQ96DG6 245 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 PLEKHA8Q96JA3 519 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 TBX15Q96SF7 602 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 SPATA5L1Q9BVQ7 753 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 ELOVL3Q9HB03 270 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 MAN2C1Q9NTJ4 1040 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF229Q9UJW7 825 aa9.03□□□□□ -0.96
SMARCC1-205ENST00000483847 NOTCH3Q9UM47 2321 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 A0A0U1RQK1 487 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 MCIDASD6RGH6 385 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms