RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TMEM178BH3BS89 294 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 SLC2A10O95528 541 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 GSTM3P21266 225 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 AQP1P29972 269 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 POLR2JP52435 117 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 PCBP3P57721 371 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 BPIFB3P59826 476 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 FGF12P61328 243 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 MRPS34P82930 218 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 CDK6Q00534 326 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 HIST3H3Q16695 136 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 MSANTD1Q6ZTZ1 278 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 EIF1ADQ8N9N8 165 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 TBC1D15Q8TC07 691 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 NEIL1Q96FI4 390 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 OR2V2Q96R30 315 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 WFDC6Q9BQY6 131 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 PCGF1Q9BSM1 259 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 MAN2C1Q9NTJ4 1040 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 IL19Q9UHD0 177 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 POMT1Q9Y6A1 747 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 CPSF4LA6NMK7 179 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 FMO6PO60774 539 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 SERPINB7O75635 380 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 TRMUO75648 421 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 CLPXO76031 633 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 F13BP05160 661 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 CSF1P09603 554 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 THRBP10828 461 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 BMP2P12643 396 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 ACADSP16219 412 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 FAM189A2Q15884 450 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF774Q6NX45 483 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF613Q6PF04 617 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 NLRC3Q7RTR2 1065 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 HDDC2Q7Z4H3 204 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 ARMC8Q8IUR7 673 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 GOLGA6L1Q8N7Z2 621 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 ATG16L2Q8NAA4 619 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 OR8B3Q8NGG8 313 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 SSMEM1Q8WWF3 244 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 DYRK2Q92630 601 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 OR8B2Q96RD0 313 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 OR2H1Q9GZK4 316 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 PAIP1Q9H074 479 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 SLCO1B3Q9NPD5 702 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 HAO1Q9UJM8 370 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF229Q9UJW7 825 aa15.84■□□□□ 0.13
NCKIPSD-209ENST00000470006 TRPC5OSA6NMA1 111 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 M0R3H8 397 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 CHP2O43745 196 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 ABHD16AO95870 558 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 CYB5R3P00387 301 aaPredicted RBP15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 KITP10721 976 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 CPT2P23786 658 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 SLC6A2P23975 617 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 RPL15P61313 204 aaKnown RBP15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 CD47Q08722 323 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 C10orf128Q5T292 105 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 SLC2A7Q6PXP3 512 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 LINC00114Q6XXX2 140 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 Q6ZPA2 131 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 MAGEB18Q96M61 343 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 PAIP2Q9BPZ3 127 aaKnown RBP15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 MRPL13Q9BYD1 178 aaKnown RBP15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 ROPN1BQ9BZX4 212 aaPredicted RBP15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 WNT5BQ9H1J7 359 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 ROPN1Q9HAT0 212 aaPredicted RBP15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 TMEM165Q9HC07 324 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 GCM1Q9NP62 436 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 ZIM2Q9NZV7 527 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 CLN8Q9UBY8 286 aa15.83■□□□□ 0.12
NCKIPSD-209ENST00000470006 PIP5K1CO60331 668 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 GPR137BO60478 399 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 GUCA1AP43080 201 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 PITPNBP48739 271 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 DAP3P51398 398 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 MMP16P51512 607 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 PROK1P58294 105 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 SCARB2Q14108 478 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 BEAN1Q3B7T3 259 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 Q6ZR03 302 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 VASH1Q7L8A9 365 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 SMYD1Q8NB12 490 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 OR9I1Q8NGQ6 314 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 ZNF420Q8TAQ5 688 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 ASB10Q8WXI3 467 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 GTF2H4Q92759 462 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 NABP1Q96AH0 204 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 CMBLQ96DG6 245 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 ANGPT4Q9Y264 503 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 TIMM10BQ9Y5J6 103 aa15.82■□□□□ 0.12
NCKIPSD-209ENST00000470006 CENPBD1B2RD01 187 aa15.81■□□□□ 0.12
NCKIPSD-209ENST00000470006 IFNL4K9M1U5 179 aa15.81■□□□□ 0.12
NCKIPSD-209ENST00000470006 HDAC3O15379 428 aa15.81■□□□□ 0.12
NCKIPSD-209ENST00000470006 LAP3P28838 519 aa15.81■□□□□ 0.12
NCKIPSD-209ENST00000470006 FMODQ06828 376 aa15.81■□□□□ 0.12
NCKIPSD-209ENST00000470006 BST1Q10588 318 aa15.81■□□□□ 0.12
NCKIPSD-209ENST00000470006 ENTPD8Q5MY95 495 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms