RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 B3GALT4O96024 378 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SLC2A1P11166 492 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 LIM2P55344 173 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ARHGAP11BQ3KRB8 267 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 FAM78AQ5JUQ0 283 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 LYSMD4Q5XG99 296 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM71Q6P5X7 295 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 BAP18Q8IXM2 172 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 AGBL5Q8NDL9 886 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 OR2AK2Q8NG84 335 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 OR11L1Q8NGX0 322 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 MUCL1Q96DR8 90 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 MS4A6EQ96DS6 147 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 MED18Q9BUE0 208 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SRRQ9GZT4 340 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ERVMER34-1Q9H9K5 563 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 DYNLRB1Q9NP97 96 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 FGF21Q9NSA1 209 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TAS2R4Q9NYW5 299 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 DHCR7Q9UBM7 475 aaKnown RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 PIGLQ9Y2B2 252 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ZC3H12DA2A288 527 aaKnown RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM235A6NFC5 223 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TGOLN2O43493 480 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 KLK8O60259 260 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 NME2P1O60361 137 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CD46P15529 392 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ENPP1P22413 925 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 UBE2IP63279 158 aaKnown RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 HTRA4P83105 476 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 DOC2BQ14184 412 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TRMT12Q53H54 448 aaKnown RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 METRNLQ641Q3 311 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM182Q6ZP80 229 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 Q6ZRG5 221 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SH2D5Q6ZV89 423 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ZBTB44Q8NCP5 570 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 OR51A2Q8NGJ7 313 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SLC35A4Q96G79 324 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CSF3RQ99062 836 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SPHK1Q9NYA1 384 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 PADI1Q9ULC6 663 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 DAPP1Q9UN19 280 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 STRAPQ9Y3F4 350 aaKnown RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 COL22A1Q8NFW1 1626 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF732B4DXR9 585 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 AKR7A2O43488 359 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SIGLEC6O43699 453 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 HIST1H1CP16403 213 aaKnown RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 OR8G2PQ6IF36 304 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 MARCH3Q86UD3 253 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CMTM4Q8IZR5 234 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 OR1M1Q8NGA1 313 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SLC25A43Q8WUT9 341 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SMIM19Q96E16 107 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 DHRS9Q9BPW9 319 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 BCL2L10Q9HD36 194 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 MED9Q9NWA0 146 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 AK3Q9UIJ7 227 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CD207Q9UJ71 328 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SOCS7O14512 581 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TIMM8AO60220 97 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF354AO60765 605 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 SLC2A10O95528 541 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 PDGFBP01127 241 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CTXN2P0C2S0 81 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 RPA2P15927 270 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CXCL12P48061 93 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 DCDP81605 110 aaKnown RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CDK5R1Q15078 307 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF385BQ569K4 471 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 EMC4Q5J8M3 183 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM179BQ7Z7N9 219 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 TCTE3Q8IZS6 198 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ANKLE1Q8NAG6 615 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 RELL2Q8NC24 303 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-204ENST00000448183 OR8U1Q8NH10 309 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 PIGQQ9BRB3 760 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 KIR3DX1Q9H7L2 352 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 CCL26Q9Y258 94 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 ASB1Q9Y576 335 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 DOT1LQ8TEK3 1739 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 A0A1W2PR48 441 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 OR6C68A6NDL8 312 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 OR5K3A6NET4 321 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM202A6NGA9 273 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TLCD2A6NGC4 264 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 EIF4EP06730 217 aaKnown RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 GSTP1P09211 210 aaKnown RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 MGMTP16455 207 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 SDHAP31040 664 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 FCGR2CP31995 323 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 EPHA5P54756 1037 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ELLP55199 621 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 CARD18P57730 90 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 RAB1AP62820 205 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 SEMA6DQ8NFY4 1073 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 INTS12Q96CB8 462 aaKnown RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PTDSS2Q9BVG9 487 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PBX4Q9BYU1 374 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms