RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ITGB8P26012 769 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MAPK3P27361 379 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ACAA2P42765 397 aaKnown RBP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 GRK6P43250 576 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ID4P47928 161 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 IRF4Q15306 451 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 DEFB110Q30KQ9 67 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC29A4Q7RTT9 530 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MFSD9Q8NBP5 474 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 OR1J4Q8NGS1 313 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 OR4C3Q8NH37 302 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ISOC2Q96AB3 205 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 C14orf79Q96F83 325 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 SRMSQ9H3Y6 488 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 SERTAD3Q9UJW9 196 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 RPH3AQ9Y2J0 694 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CSAG2Q9Y5P2 127 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MTCL1Q9Y4B5 1905 aaKnown RBP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 EDDM13A0A1B0GTR0 161 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 A0A1B0GV50 99 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 BRINP1O60477 761 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 IGKV1D-16P01601 117 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SERPINA5P05154 406 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SP3Q02447 781 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 PEA15Q15121 130 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ELAVL1Q15717 326 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SMAD2Q15796 467 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF77Q15935 545 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 FBXO42Q6P3S6 717 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 OR51A2Q8NGJ7 313 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 OR5M8Q8NGP6 311 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SEH1LQ96EE3 360 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 NRSN2Q9GZP1 204 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ELOVL3Q9HB03 270 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ZFP57Q9NU63 452 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 GSKIPQ9P0R6 139 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 DTX4Q9Y2E6 619 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ETV7Q9Y603 341 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 MEX3AA1L020 520 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 CISD3P0C7P0 127 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 CEBPBP17676 345 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 PNLIPRP2P54317 469 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 TAS2R19P59542 299 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SGCGQ13326 291 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 INPP5JQ15735 1006 aaPredicted RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 MEP1BQ16820 701 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ITPRIPL2Q3MIP1 535 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 WDR38Q5JTN6 314 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 KRBOX4Q5JUW0 171 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 LINC01590Q5TEZ4 76 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ULK3Q6PHR2 472 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 FAM122BQ7Z309 247 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 C12orf76Q8N812 135 aaPredicted RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 BHLHE23Q8NDY6 225 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF417Q8TAU3 575 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 NUDCD2Q8WVJ2 157 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ARL11Q969Q4 196 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 CMTM3Q96MX0 182 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 UTP23Q9BRU9 249 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 TRIM2Q9C040 744 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 PITHD1Q9GZP4 211 aaPredicted RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 VSIG4Q9Y279 399 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 MRPS23Q9Y3D9 190 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 OR4C45A6NMZ5 311 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SRPX2O60687 465 aaPredicted RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 NDUFS6O75380 124 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 OR2F2O95006 317 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SPARCP09486 303 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 NME2P22392 152 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 OR2F1Q13607 317 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ENPP2Q13822 863 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 GFOD2Q3B7J2 385 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ALG10Q5BKT4 473 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF585AQ6P3V2 769 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF765Q7L2R6 523 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 MARCH3Q86UD3 253 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 NAA40Q86UY6 237 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 PRSS35Q8N3Z0 413 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 ADAD2Q8NCV1 583 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 STOML3Q8TAV4 291 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 PHOSPHO1Q8TCT1 267 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 C15orf40Q8WUR7 153 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC25A36Q96CQ1 311 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 PHPT1Q9NRX4 125 aaPredicted RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 GRHPRQ9UBQ7 328 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 TBC1D29Q9UFV1 150 aa8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 KLF2Q9Y5W3 355 aaPredicted RBP8.92□□□□□ -0.98
PTCHD4-202ENST00000398738 SCN5AQ14524 2016 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 SNAPINO95295 136 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 ERCC1P07992 297 aaPredicted RBP8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 CD80P33681 288 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC9A3R2Q15599 337 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 RNASE10Q5GAN6 216 aaKnown RBP8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 VITQ6UXI7 678 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 DPY19L2P2Q6ZN68 376 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 RTN4RL2Q86UN3 420 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF584Q8IVC4 421 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 METTL27Q8N6F8 245 aaPredicted RBP8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 OR14C36Q8NHC7 312 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 TAS2R4Q9NYW5 299 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms