RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SLC31A2O15432 143 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF354AO60765 605 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 REM1O75628 298 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 IGHA1P01876 353 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 JMJD7P0C870 316 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 SNRPBP14678 240 aaKnown RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 ACVR1BP36896 505 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 TMEM44Q2T9K0 475 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 BEX5Q5H9J7 111 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 YOD1Q5VVQ6 348 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 MED25Q71SY5 747 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 NRMQ8IXM6 262 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 LINC00471Q8N535 108 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 OR10H4Q8NGA5 316 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 THAP4Q8WY91 577 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 ADOQ96SZ5 270 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 STACQ99469 402 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 LMF2Q9BU23 707 aaKnown RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 TLNRD1Q9H1K6 362 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 FOXJ2Q9P0K8 574 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF223Q9UK11 482 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 SLC13A4Q9UKG4 626 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 TMEM218A2RU14 115 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 OR2T1O43869 369 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 STK17BO94768 372 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 MRPL3P09001 348 aaKnown RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 FUT1P19526 365 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 HTR1FP30939 366 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 OMPP47874 163 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 GPR143P51810 404 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 SLC16A1P53985 500 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 RGS8P57771 180 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 TRA2AQ13595 282 aaKnown RBP eCLIP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 TGIF1Q15583 401 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 PGGHGQ32M88 737 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 B3GNTL1Q67FW5 361 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 PIGXQ8TBF5 258 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 SAMD8Q96LT4 415 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 AUNIPQ9H7T9 357 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 Q9N2J8 555 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 ASF1BQ9NVP2 202 aa13.61□□□□□ -0.23
BRAT1-201ENST00000340611 PTRH2Q9Y3E5 179 aaKnown RBP13.61□□□□□ -0.23
BRAT1-201ENST00000340611 BLACEA4D250 179 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 SPI1P17947 270 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 EIF2S3P41091 472 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 RNF212Q495C1 297 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 NCMAPQ5T1S8 102 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 UNQ6494/PRO21346Q6UXR6 183 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 SLC29A4Q7RTT9 530 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 OR5M1Q8NGP8 315 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 PINK1Q9BXM7 581 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 RTN4RQ9BZR6 473 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 UNKLQ9H9P5 680 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 SEBOXQ9HB31 216 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 EXOGQ9Y2C4 368 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 MPDZO75970 2070 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 IGLV3-12A0A075B6K2 115 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 MT-CO3P00414 261 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 THY1P04216 161 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 CCKBRP32239 447 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 SRSF3P84103 164 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 DHRS7BQ6IAN0 325 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 CXXC5Q7LFL8 322 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 ACBD7Q8N6N7 88 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 C17orf47Q8NEP4 570 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 OR5W2Q8NH69 310 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 S100PBPQ96BU1 408 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 TIMP4Q99727 224 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 HCAR1Q9BXC0 346 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 C9orf172C9J069 976 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 SMAD9O15198 467 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 FARS2O95363 451 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF35P13682 527 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 IFNGR2P38484 337 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 ACSM1Q08AH1 577 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 EBPQ15125 230 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 MRPL14Q6P1L8 145 aaKnown RBP13.6□□□□□ -0.23
BRAT1-201ENST00000340611 APOOLQ6UXV4 268 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 OR1S2Q8NGQ3 325 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 TMEM255BQ8WV15 326 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 METTL21AQ8WXB1 218 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 MFFQ9GZY8 342 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 CALML5Q9NZT1 146 aa13.6□□□□□ -0.23
BRAT1-201ENST00000340611 EML6Q6ZMW3 1958 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 BOD1L1Q8NFC6 3051 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 A0A0G2JK05 382 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 A0A1B0GW55 424 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 DAPL1A0PJW8 107 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF705EA8MWA4 302 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-201ENST00000340611 CDC42EP2O14613 210 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 AGR2O95994 175 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 DUX4L2P0CJ85 424 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 DUX4L3P0CJ86 424 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 DUX4L4P0CJ87 422 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 DUX4L5P0CJ88 424 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 DUX4L6P0CJ89 424 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 DUX4L7P0CJ90 424 aa13.59□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF44P15621 663 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms