RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SCARF2Q96GP6 870 aaPredicted RBP11.55□□□□□ -0.56
LIN54-201ENST00000340417 SLC25A37Q9NYZ2 338 aa11.55□□□□□ -0.56
LIN54-201ENST00000340417 KCNG2Q9UJ96 466 aa11.55□□□□□ -0.56
LIN54-201ENST00000340417 V9GY05 133 aa11.55□□□□□ -0.56
LIN54-201ENST00000340417 KLF3P57682 345 aaPredicted RBP11.54□□□□□ -0.56
LIN54-201ENST00000340417 TMEM151AQ8N4L1 468 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 SBK2P0C263 348 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ACTBP60709 375 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ACTG1P63261 375 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 UGT2A3Q6UWM9 527 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ZNF573Q86YE8 665 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 CCL17Q92583 94 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ZNF286AQ9HBT8 521 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ZNF404Q494X3 552 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 MEX3BQ6ZN04 569 aaKnown RBP11.54□□□□□ -0.56
LIN54-201ENST00000340417 LACC1Q8IV20 430 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 C9orf40Q8IXQ3 194 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 OR52H1Q8NGJ2 320 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 SLC7A13Q8TCU3 470 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 RAB1CQ92928 201 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 TAAR8Q969N4 342 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 SELENOIQ9C0D9 397 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 HTR1FP30939 366 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ZNF91Q05481 1191 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 GNMTQ14749 295 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 NDUFA5Q16718 116 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 TMEM251Q8N6I4 163 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 SLC30A2Q9BRI3 323 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 TAAR3PQ9P1P4 343 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 HRKO00198 91 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 GPRIN2O60269 458 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 SNAPC5O75971 98 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ALKBH1Q13686 389 aaKnown RBP11.54□□□□□ -0.56
LIN54-201ENST00000340417 SLC22A4Q9H015 551 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
LIN54-201ENST00000340417 CNOT11Q9UKZ1 510 aaKnown RBP11.54□□□□□ -0.56
LIN54-201ENST00000340417 EPHA1P21709 976 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 PRSS3P35030 304 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 DAPP51397 102 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 ZNF615Q8N8J6 731 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 INO80EQ8NBZ0 244 aaPredicted RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 UTP4Q969X6 686 aaKnown RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 GMPPAQ96IJ6 420 aaPredicted RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 NIPSNAP1Q9BPW8 284 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 OCEL1Q9H607 264 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 OPA3Q9H6K4 179 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 PPP1R14DQ9NXH3 145 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 FBXL2Q9UKC9 423 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 AHRRA9YTQ3 701 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 H7C1Q1 480 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 HS3ST1O14792 307 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 NDUFB3O43676 98 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 ZNF182P17025 639 aaPredicted RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 CRHBPP24387 322 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 SOX18P35713 384 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 FUT7Q11130 342 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 ASCL5Q7RTU5 278 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 ZDHHC23Q8IYP9 409 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 ST8SIA4Q92187 359 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 OCSTAMPQ9BR26 566 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 SH2D1BO14796 132 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 BET1O15155 118 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 TK1P04183 234 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 AQP6Q13520 282 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 OGFRL1Q5TC84 451 aaPredicted RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 C1QL3Q5VWW1 255 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 LRRC56Q8IYG6 542 aaPredicted RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 OR51E1Q8TCB6 317 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 ZNF721Q8TF20 911 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 TMEM59Q9BXS4 323 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 TGIF2Q9GZN2 237 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 CNOT2Q9NZN8 540 aaKnown RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 SLCO1B1Q9Y6L6 691 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 TDRD6O60522 2096 aaKnown RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 TCF20Q9UGU0 1960 aaKnown RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 A6NIN4 97 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 MRI1Q9BV20 369 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 MOB1AQ9H8S9 216 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 DNAJB12Q9NXW2 375 aaKnown RBP11.53□□□□□ -0.56
LIN54-201ENST00000340417 AASSQ9UDR5 926 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 RBP2P50120 134 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 HYAL4Q2M3T9 481 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 ACBD4Q8NC06 268 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 OR10X1Q8NGY0 326 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 HAS2Q92819 552 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 CENPOQ9BU64 300 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 GPATCH2Q9NW75 528 aa11.53□□□□□ -0.56
LIN54-201ENST00000340417 A0A1W2PQD3 144 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 MYF6P23409 242 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 ZNF74Q16587 644 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 CDCP2Q5VXM1 449 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 MRM1Q6IN84 353 aaKnown RBP11.52□□□□□ -0.56
LIN54-201ENST00000340417 UBE3DQ7Z6J8 389 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 LSRQ86X29 649 aaPredicted RBP11.52□□□□□ -0.56
LIN54-201ENST00000340417 CCDC71Q8IV32 467 aaPredicted RBP11.52□□□□□ -0.56
LIN54-201ENST00000340417 ZNF695Q8IW36 515 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 SPERTQ8NA61 448 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 THAP6Q8TBB0 222 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms