RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MADCAM1Q13477 382 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 CCDC157Q569K6 752 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 ACER2Q5QJU3 275 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 HES5Q5TA89 166 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 ASB18Q6ZVZ8 466 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 OR10AC1Q8NH08 325 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 C15orf40Q8WUR7 153 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 TSEN15Q8WW01 171 aaKnown RBP17.3■□□□□ 0.36
HOXC4-201ENST00000303406 ORAI1Q96D31 301 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 C7orf50Q9BRJ6 194 aaKnown RBP17.3■□□□□ 0.36
HOXC4-201ENST00000303406 C1orf198Q9H425 327 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 FOXJ2Q9P0K8 574 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 A0A0B4J203 849 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 A0A1W2PNU3 283 aaPredicted RBP17.29■□□□□ 0.36
HOXC4-201ENST00000303406 ANXA2P2A6NMY6 339 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 CD2P06729 351 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 ANXA2P07355 339 aaKnown RBP17.29■□□□□ 0.36
HOXC4-201ENST00000303406 CD37P11049 281 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 AGFG1P52594 562 aaKnown RBP17.29■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF57Q68EA5 555 aaPredicted RBP17.29■□□□□ 0.36
HOXC4-201ENST00000303406 PLET1Q6UQ28 207 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF227Q86WZ6 799 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 CMTM4Q8IZR5 234 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 NIPAL2Q9H841 368 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 LIN7BQ9HAP6 207 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 G6PC2Q9NQR9 355 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 OR52A1Q9UKL2 312 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 DHDHQ9UQ10 334 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 SLC22A13Q9Y226 551 aa17.29■□□□□ 0.36
HOXC4-201ENST00000303406 TRAV8-7A0A075B6U6 113 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 FAM240BA0A1B0GVZ2 78 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 MEIOCA2RUB1 952 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 WNT11O96014 354 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 OPN1LWP04000 364 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 H2BFMP0C1H6 154 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 UBCP0CG48 685 aaKnown RBP17.28■□□□□ 0.36
HOXC4-201ENST00000303406 TPTEP56180 551 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 CLDN20P56880 219 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 B3GALT5-AS1P59052 145 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 MRPS10P82664 201 aaKnown RBP17.28■□□□□ 0.36
HOXC4-201ENST00000303406 CAMK2DQ13557 499 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 TMEM244Q5VVB8 128 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 OTPQ5XKR4 325 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 MDGA2Q7Z553 956 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 GPAT4Q86UL3 456 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 OR51A4Q8NGJ6 313 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 PSMF1Q92530 271 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 YIPF5Q969M3 257 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 SLAMF6Q96DU3 332 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 SLC25A38Q96DW6 304 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 IP6K3Q96PC2 410 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 MMP28Q9H239 520 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 MOB1AQ9H8S9 216 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 PLEKHA1Q9HB21 404 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 OR5V1Q9UGF6 321 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 STEAP1Q9UHE8 339 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 HHLA2Q9UM44 414 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 EML6Q6ZMW3 1958 aa17.28■□□□□ 0.36
HOXC4-201ENST00000303406 CSRP1P21291 193 aaKnown RBP17.27■□□□□ 0.36
HOXC4-201ENST00000303406 DLSTP36957 453 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 FCRLAQ7L513 359 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.27■□□□□ 0.36
HOXC4-201ENST00000303406 LINC00346Q8IVM7 164 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 SMIM4Q8WVI0 70 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 ASB5Q8WWX0 329 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 TMEM54Q969K7 222 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 INTS12Q96CB8 462 aaKnown RBP17.27■□□□□ 0.36
HOXC4-201ENST00000303406 HAVCR1Q96D42 359 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 SMAD5Q99717 465 aaKnown RBP17.27■□□□□ 0.36
HOXC4-201ENST00000303406 SF3B5Q9BWJ5 86 aaKnown RBP17.27■□□□□ 0.36
HOXC4-201ENST00000303406 PCSK5Q92824 1860 aa17.27■□□□□ 0.36
HOXC4-201ENST00000303406 HMX3A6NHT5 357 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 CDK2AP1O14519 115 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 EEF1E1O43324 174 aaKnown RBP17.26■□□□□ 0.35
HOXC4-201ENST00000303406 RAMP1O60894 148 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 IGFBP3P17936 291 aaPredicted RBP17.26■□□□□ 0.35
HOXC4-201ENST00000303406 HLA-DMAP28067 261 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 CYB561P49447 251 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 EIF2B2P49770 351 aaKnown RBP17.26■□□□□ 0.35
HOXC4-201ENST00000303406 CD300CQ08708 224 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 C10orf128Q5T292 105 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 B3GNTL1Q67FW5 361 aaPredicted RBP17.26■□□□□ 0.35
HOXC4-201ENST00000303406 KLHL24Q6TFL4 600 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 FOXL2NBQ6ZUU3 175 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 TMPRSS12Q86WS5 348 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 S100A16Q96FQ6 103 aaKnown RBP17.26■□□□□ 0.35
HOXC4-201ENST00000303406 JSRP1Q96MG2 331 aaPredicted RBP17.26■□□□□ 0.35
HOXC4-201ENST00000303406 MARVELD1Q9BSK0 173 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 OR2B2Q9GZK3 357 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 CKLFQ9UBR5 152 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 EMC9Q9Y3B6 208 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 CACNG2Q9Y698 323 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 FREM3P0C091 2139 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 SDK2Q58EX2 2172 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 TMEM269A0A1B0GVZ9 245 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 A0A1W2PPL8 197 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 MEGF11A6BM72 1044 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 MASP2O00187 686 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 LANCL1O43813 399 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 RAD1O60671 282 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms