RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 GPR137BO60478 399 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 IGHG1P01857 330 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 MMP7P09237 267 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 PRKAR1BP31321 381 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ARHGDIAP52565 204 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 CDK5R2Q13319 367 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 TAF11Q15544 211 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 KPRPQ5T749 579 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 SAMD5Q5TGI4 173 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 RUSC1-AS1Q66K80 236 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 SLC27A4Q6P1M0 643 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 VASH1Q7L8A9 365 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 NLRC3Q7RTR2 1065 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ANP32BQ92688 251 aaKnown RBP12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 MCHR2Q969V1 340 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 POM121L2Q96KW2 1035 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 SIGLEC11Q96RL6 698 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 NUF2Q9BZD4 464 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ELOVL3Q9HB03 270 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 TLDC2A0PJX2 215 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 TMEM178BH3BS89 294 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 BPGMP07738 259 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ZNF32P17041 273 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 FGF12P61328 243 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 BST1Q10588 318 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 OR1Q1Q15612 314 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ZNF774Q6NX45 483 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 RFPL4BQ6ZWI9 263 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ALDH16A1Q8IZ83 802 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 OR8B3Q8NGG8 313 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ITLN1Q8WWA0 313 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 PPP1R14AQ96A00 147 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 NEIL1Q96FI4 390 aaPredicted RBP12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 MAGEB18Q96M61 343 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 OR8B2Q96RD0 313 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 PCGF1Q9BSM1 259 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 TMEM43Q9BTV4 400 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 BCL2L10Q9HD36 194 aa12.85□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 A0A0B4J2E0 115 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 A0A1B0GX12 115 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ITM2AO43736 263 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 OPN1MWP04001 364 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 OPN1MW2P0DN77 364 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 OPN1MW3P0DN78 364 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 VSIG8P0DPA2 414 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ETS2P15036 469 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 GSTM3P21266 225 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 IL12AP29459 219 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 PCBP3P57721 371 aaKnown RBP12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 RGS8P57771 180 aaPredicted RBP12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ARL9Q6T311 187 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 GDPGP1Q6ZNW5 385 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 NUDCD3Q8IVD9 361 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 AKR7LQ8NHP1 331 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 VANGL1Q8TAA9 524 aaPredicted RBP12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 GATAD2BQ8WXI9 593 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 MAL2Q969L2 176 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 OR2V2Q96R30 315 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 ZNF347Q96SE7 839 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 SPATA5L1Q9BVQ7 753 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 RASSF4Q9H2L5 321 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 SIAEQ9HAT2 523 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 MAN2C1Q9NTJ4 1040 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 CLN8Q9UBY8 286 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 SLC13A4Q9UKG4 626 aa12.84□□□□□ -0.35
NEDD8-MDP1-204ENST00000605847 MCIDASD6RGH6 385 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 H0YL77 283 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 IFNL4K9M1U5 179 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TNFRSF13BO14836 293 aaPredicted RBP12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF205O95201 554 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 THRBP10828 461 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 PITPNBP48739 271 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RPL14P50914 215 aaKnown RBP12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CDH12P55289 794 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 PSG7Q13046 419 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 HIST3H2AQ7L7L0 130 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RANBP3LQ86VV4 465 aaPredicted RBP12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 PTOV1Q86YD1 416 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 HIST1H2ACQ93077 130 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 C4orf45Q96LM5 186 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RMND5AQ9H871 391 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NANSQ9NR45 359 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ACOXLQ9NUZ1 547 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 AIG1Q9NVV5 245 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TAS2R5Q9NYW4 299 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RAP2CQ9Y3L5 183 aa12.83□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ENSAO43768 121 aaKnown RBP12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CH25HO95992 272 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 IGHV4-59P01825 116 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 IL6P05231 212 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ALDOCP09972 364 aaKnown RBP12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NUDT7P0C024 238 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZCCHC18P0CG32 403 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 UMPSP11172 480 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms