RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 A0A096LNJ9 63 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TRBV7-9A0A0J9YWB2 115 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 LOC285095A0A1B0GVY8 99 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TSPAN11A1L157 253 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 GSAPA4D1B5 854 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 MGAT4DA6NG13 374 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ARGFXA6NJG6 315 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 A8MUA0 341 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PDZK1P1A8MUH7 402 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 A8MUI8 341 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 D6RAR5 112 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 J3QKU1 62 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 K7ENP7 123 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 POLR1CO15160 346 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 ALOX15BO15296 676 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 NVLO15381 856 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 STX7O15400 261 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 SLC7A4O43246 635 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 RAD1O60671 282 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 SPAG6O75602 509 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 KLF7O75840 302 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 SRP72O76094 671 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 STK17BO94768 372 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ANP32DO95626 131 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 MBD3O95983 291 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 RLN1P04808 185 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 GP1BAP07359 652 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CAPN1P07384 714 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 IVLP07476 585 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 KRT7P08729 469 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CCDC172P0C7W6 258 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ALPPL2P10696 532 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PNMTP11086 282 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ATP1B2P14415 290 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 ZNF7P17097 686 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 RCC1P18754 421 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 XRCC1P18887 633 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 TCN2P20062 427 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PSMB5P28074 263 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PRDX3P30048 256 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 PEBP1P30086 187 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 CCR7P32248 378 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 DLSTP36957 453 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 DUSP3P51452 185 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 CAPZA1P52907 286 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 KCNK10P57789 538 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 KIAA1024LP59773 190 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 EIF3EP60228 445 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 AP1S1P61966 158 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 UBE2IP63279 158 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 ACTA1P68133 377 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 XIAPP98170 497 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ELP6Q0PNE2 266 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 BNIP1Q12981 228 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CUL1Q13616 776 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TSTA3Q13630 321 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 PDK1Q15118 436 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PDK2Q15119 407 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 SPA17Q15506 151 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 HADHQ16836 314 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 LRRC36Q1X8D7 754 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 HKDC1Q2TB90 917 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TCHHL1Q5QJ38 904 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 GPRC6AQ5T6X5 926 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 HENMT1Q5T8I9 393 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 MLIPQ5VWP3 458 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ANKRD22Q5VYY1 191 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 FRMPD2BQ6IN97 320 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 LRRC8BQ6P9F7 803 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CYHR1Q6ZMK1 362 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 MBOAT1Q6ZNC8 495 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 C16orf47Q6ZP98 133 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 TMEM26Q6ZUK4 368 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 NCCRP1Q6ZVX7 275 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 ASRGL1Q7L266 308 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TSEN54Q7Z6J9 526 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 KIAA1328Q86T90 577 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 AMZ2Q86W34 360 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 SERPINA9Q86WD7 417 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 C17orf82Q86X59 251 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 TRAPPC5Q8IUR0 188 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PSTKQ8IV42 348 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 KLHL7Q8IXQ5 586 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 SFRP1Q8N474 314 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CSNK1A1LQ8N752 337 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ARL10Q8N8L6 244 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 MSANTD4Q8NCY6 345 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ZNF740Q8NDX6 193 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 FDCSPQ8NFU4 85 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OR4D9Q8NGE8 314 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OR51G1Q8NGK1 321 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OR52K1Q8NGK4 314 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OR6M1Q8NGM8 313 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 LKAAEAR1Q8TD35 194 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 BRSK1Q8TDC3 778 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 CT55Q8WUE5 264 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 SKA2Q8WVK7 121 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 LCN9Q8WX39 176 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms