RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 PRKCDQ05655 676 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 RUNX1T1Q06455 604 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 MED21Q13503 144 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 FHL1Q13642 323 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 TRAM2Q15035 370 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 ANKDD1AQ495B1 522 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 C1orf94Q6P1W5 598 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 PGBD2Q6P3X8 592 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 RNF113BQ8IZP6 322 aaKnown RBP9.73□□□□□ -0.85
BMP4-204ENST00000558961 SLC22A24Q8N4F4 322 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 DHRSXQ8N5I4 330 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 OR10H5Q8NGA6 315 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 OR52J3Q8NH60 311 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 ACOT11Q8WXI4 607 aaPredicted RBP9.73□□□□□ -0.85
BMP4-204ENST00000558961 NMD3Q96D46 503 aaKnown RBP9.73□□□□□ -0.85
BMP4-204ENST00000558961 BPIFA2Q96DR5 249 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 PITX2Q99697 317 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 FNDC11Q9BVV2 318 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 Q9H521 79 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 INIPQ9NRY2 104 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 REV1Q9UBZ9 1251 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 FBXL3Q9UKT7 428 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 NDRG4Q9ULP0 352 aaKnown RBP9.73□□□□□ -0.85
BMP4-204ENST00000558961 POFUT2Q9Y2G5 429 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 PCDHGB5Q9Y5G0 923 aa9.73□□□□□ -0.85
BMP4-204ENST00000558961 YLPM1P49750 1951 aaKnown RBP9.72□□□□□ -0.85
BMP4-204ENST00000558961 A0A087WUU8 490 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 B9A039 149 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 TRMUO75648 421 aaKnown RBP9.72□□□□□ -0.85
BMP4-204ENST00000558961 TP53P04637 393 aaPredicted RBP9.72□□□□□ -0.85
BMP4-204ENST00000558961 GNAO1P09471 354 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 OR8G3PP0DMU2 310 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 MAKP20794 623 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 POLR2IP36954 125 aaKnown RBP9.72□□□□□ -0.85
BMP4-204ENST00000558961 SERPINF1P36955 418 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 SLC9A3P48764 834 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 PPOXP50336 477 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 EFNA4P52798 201 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 NUDT6P53370 316 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 RAD23AP54725 363 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 NPRL3Q12980 569 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 IL18R1Q13478 541 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 C10orf128Q5T292 105 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 TTC23Q5W5X9 447 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 DPPA2Q7Z7J5 298 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 ZER1Q7Z7L7 766 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 ZNF584Q8IVC4 421 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 SKA3Q8IX90 412 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 LRRC75AQ8NAA5 344 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 OR9Q2Q8NGE9 314 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 MOSPD2Q8NHP6 518 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 MCHR2Q969V1 340 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 KCNK17Q96T54 332 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 NIPSNAP1Q9BPW8 284 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 REG4Q9BYZ8 158 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 TXNIPQ9H3M7 391 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 PLK3Q9H4B4 646 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 FBXO9Q9UK97 447 aaPredicted RBP9.72□□□□□ -0.85
BMP4-204ENST00000558961 PMF1-BGLAPU3KQ54 211 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 ZFHX3Q15911 3703 aa9.72□□□□□ -0.85
BMP4-204ENST00000558961 FN1P02751 2386 aaKnown RBP9.71□□□□□ -0.85
BMP4-204ENST00000558961 MCIDASD6RGH6 385 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 SMAD7O15105 426 aaKnown RBP9.71□□□□□ -0.86
BMP4-204ENST00000558961 SSX4O60224 188 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 QDPRP09417 244 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 OR4A8P0C604 315 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 CD79AP11912 226 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 NR2C1P13056 603 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 IFI30P13284 250 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 ZNF35P13682 527 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 CAPZA2P47755 286 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 OMPP47874 163 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 GSSP48637 474 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 RPS6KA3P51812 740 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 CLRN1P58418 232 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 DSCR9P59020 149 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 SNRPD2P62316 118 aaKnown RBP9.71□□□□□ -0.86
BMP4-204ENST00000558961 RAB1AP62820 205 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 COX10Q12887 443 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 RAB35Q15286 201 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 ZIK1Q3SY52 487 aaPredicted RBP9.71□□□□□ -0.86
BMP4-204ENST00000558961 ALG10Q5BKT4 473 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 FAM205BPQ63HN1 556 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 TMPRSS11FQ6ZWK6 438 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 MBOAT2Q6ZWT7 520 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 NRMQ8IXM6 262 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 OR4K5Q8NGD3 323 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 FGFBP3Q8TAT2 258 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 ZNF519Q8TB69 540 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 HDAC2Q92769 488 aaKnown RBP9.71□□□□□ -0.86
BMP4-204ENST00000558961 FBXO17Q96EF6 278 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 SORCS2Q96PQ0 1159 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 GPA33Q99795 319 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 PAPOLBQ9NRJ5 636 aaKnown RBP9.71□□□□□ -0.86
BMP4-204ENST00000558961 KRT84Q9NSB2 600 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 TMCC3Q9ULS5 477 aa9.71□□□□□ -0.86
BMP4-204ENST00000558961 NIPBLQ6KC79 2804 aaeCLIP9.71□□□□□ -0.86
BMP4-204ENST00000558961 IGHV4-30-2A0A087WSY4 118 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms