RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 LOC100289279A0A1B0GTE1 492 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 FAM221AA4D161 298 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ANKRD34BA5PLL1 514 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 MEGF11A6BM72 1044 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NPIPA5E9PKD4 350 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 SULT1C2O00338 296 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 SLC17A2O00624 439 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 EREGO14944 169 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 GMFGO60234 142 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ALOX12BO75342 701 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 AQP8O94778 261 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 PLGP00747 810 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 IL5P05113 134 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ADRB1P08588 477 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 CPN1P15169 458 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF823P16415 610 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ADRA2CP18825 462 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 BCKDHBP21953 392 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 KIR3DL2P43630 455 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 EFNA3P52797 238 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 DMWDQ09019 674 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 EIF2B1Q14232 305 aaKnown RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NR0B2Q15466 257 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 Q5BKY6 102 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 GLT8D1Q68CQ7 371 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ANKRD16Q6P6B7 361 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 DEGS2Q6QHC5 323 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 DNM1P46Q6ZS02 220 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 LANCL3Q6ZV70 420 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 HDDC2Q7Z4H3 204 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 REC114Q7Z4M0 266 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ANKRD37Q7Z713 158 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 GLB1L2Q8IW92 636 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 PRSS58Q8IYP2 241 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 SLC25A45Q8N413 288 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 DUSP19Q8WTR2 217 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ASB10Q8WXI3 467 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF524Q96C55 264 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 GPR137Q96N19 417 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 TAAR9Q96RI9 348 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF587Q96SQ5 575 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NUDT16L1Q9BRJ7 211 aaKnown RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 TTYH1Q9H313 450 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 PISDQ9UG56 409 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NPIPA1Q9UND3 350 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NPTNQ9Y639 398 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 EXPH5Q8NEV8 1989 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 TRAV8-7A0A075B6U6 113 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 A0A0A6YYH2 397 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 GGT3PA6NGU5 568 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 A6NJ64 397 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 VSTM2BA6NLU5 285 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 SNRPGP15A8MWD9 76 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 FTCDNL1E5RQL4 147 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 H7C417 338 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 K7ESF4 209 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 AGRPO00253 132 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ETV2O00321 342 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 RBBP9O75884 186 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NDUFB6O95139 128 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ONECUT2O95948 504 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 HRGP04196 525 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 MAS1P04201 325 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 UBCP0CG48 685 aaKnown RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ACHEP22303 614 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 CCKBRP32239 447 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 CXCL12P48061 93 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 MECP2P51608 486 aaKnown RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 CLDN12P56749 244 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ACTBP60709 375 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 GPR85P60893 370 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ACTG1P63261 375 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 RBMS2Q15434 407 aaKnown RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ST3GAL2Q16842 350 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NKAIN1Q4KMZ8 207 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 PRAMEF17Q5VTA0 474 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 LAMTOR1Q6IAA8 161 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 PTCRAQ6ISU1 281 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF704Q6ZNC4 412 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 H1FNTQ75WM6 255 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 CATSPERDQ86XM0 798 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 SPICQ8N5J4 248 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ADPRHL1Q8NDY3 354 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NFAM1Q8NET5 270 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 RNF138Q8WVD3 245 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 CLDN23Q96B33 292 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 C8orf44Q96CB5 159 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ORAI1Q96D31 301 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 KLHDC3Q9BQ90 382 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 NUDT22Q9BRQ3 303 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 POTEKPQ9BYX7 375 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF436Q9C0F3 470 aaPredicted RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 CHST11Q9NPF2 352 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 FANCFQ9NPI8 374 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 MRPL22Q9NWU5 206 aaKnown RBP6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ALKBH4Q9NXW9 302 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 RARRES3Q9UL19 164 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 331.1 ms