RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ZNF836Q6ZNA1 936 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 ASCL5Q7RTU5 278 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 HDDC2Q7Z4H3 204 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 RDH10Q8IZV5 341 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 LIX1Q8N485 282 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 JAGN1Q8N5M9 183 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 ACOT4Q8N9L9 421 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 PROKR2Q8NFJ6 384 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 ZNF596Q8TC21 504 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 PHF10Q8WUB8 498 aaKnown RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 CHCHD10Q8WYQ3 142 aaPredicted RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 RAB1CQ92928 201 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 TOP1MTQ969P6 601 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 KIAA1143Q96AT1 154 aaPredicted RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 CMTM7Q96FZ5 175 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 ITCHQ96J02 903 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 JSRP1Q96MG2 331 aaPredicted RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 FOPNLQ96NB1 174 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 OR2M2Q96R28 347 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 MRPL37Q9BZE1 423 aaKnown RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 ACTR6Q9GZN1 396 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 GBA3Q9H227 469 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 NEUROG2Q9H2A3 272 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 FBXO44Q9H4M3 255 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 RANBP3Q9H6Z4 567 aaPredicted RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 MRPL47Q9HD33 250 aaKnown RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 FGF20Q9NP95 211 aaPredicted RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 PXMP2Q9NR77 195 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 UXTQ9UBK9 157 aaPredicted RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 CRCT1Q9UGL9 99 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 BTNL2Q9UIR0 455 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 LSM7Q9UK45 103 aaKnown RBP2.09□□□□□ -2.07
CCDC38-208ENST00000549876 CFAP45Q9UL16 551 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 STK38LQ9Y2H1 464 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 UGT2A1Q9Y4X1 527 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 V9GY05 133 aa2.09□□□□□ -2.07
CCDC38-208ENST00000549876 IGLV3-22A0A075B6J6 115 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 IGHV3OR16-13A0A075B7E8 117 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 LOC100653049A0A140TA62 436 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 A0A1B0GUH1 482 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 A0A1W2PPV4 95 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 A0A1W2PRD5 423 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF879B4DU55 563 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 M0R3G1 203 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 MRPS12O15235 138 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 MGRN1O60291 552 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 EIF4E2O60573 245 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF780AO75290 641 aaPredicted RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 KRT34O76011 436 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 CCNB2O95067 398 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 SLC25A27O95847 323 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 FGGP02679 453 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 UBCP0CG48 685 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 STAG3L2P0CL84 134 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 TCN1P20061 433 aaPredicted RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 SLC2A5P22732 501 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 COX7A1P24310 79 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 RORAP35398 523 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 RPS9P46781 194 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 CD151P48509 253 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 CCNG1P51959 295 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 UGT2B15P54855 530 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 PRPS1P60891 318 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 ADARB1P78563 741 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 NCF4Q15080 339 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 STK38Q15208 465 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 SF3A2Q15428 464 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 LINC00483Q53H64 154 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 HSP90AA4PQ58FG1 418 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 PPM1LQ5SGD2 360 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 TIGD3Q6B0B8 471 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 FAM71E1Q6IPT2 247 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 COX15Q7KZN9 410 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 PRSS41Q7RTY9 318 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 TMEM135Q86UB9 458 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 SLC26A11Q86WA9 606 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 APRG1Q8IVJ8 170 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 CSGALNACT2Q8N6G5 542 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF557Q8N988 423 aaPredicted RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 TTC29Q8NA56 475 aaPredicted RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 OR10G3Q8NGC4 313 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 OR2G2Q8NGZ5 317 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 FAM151AQ8WW52 585 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 TMEM158Q8WZ71 300 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 FGF14Q92915 247 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 SMARCD2Q92925 531 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 UCN3Q969E3 161 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 C9orf72Q96LT7 481 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 TMEM246Q9BRR3 403 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 POLR2J2Q9GZM3 115 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 POLR2J3Q9H1A7 115 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 C20orf85Q9H1P6 137 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 CWH43Q9H720 699 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 ADAP2Q9NPF8 381 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 IL26Q9NPH9 171 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 SAMSN1Q9NSI8 373 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 EXD2Q9NVH0 621 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 KCNIP1Q9NZI2 227 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 MTRF1LQ9UGC7 380 aaKnown RBP2.08□□□□□ -2.08
CCDC38-208ENST00000549876 SLC17A4Q9Y2C5 497 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms