RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 MUC20Q8N307 709 aaPredicted RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 PARP8Q8N3A8 854 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 SMYD1Q8NB12 490 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 OR4F5Q8NH21 305 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 AENQ8WTP8 325 aaKnown RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 THOC1Q96FV9 657 aaKnown RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 MARS2Q96GW9 593 aaKnown RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 MAELQ96JY0 434 aaKnown RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 CCT8L2Q96SF2 557 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 BEX1Q9HBH7 125 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 NPHS2Q9NP85 383 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 TMEM106BQ9NUM4 274 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 POLR3KQ9Y2Y1 108 aaPredicted RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 TANC2Q9HCD6 1990 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 TRAPPC13A5PLN9 417 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 M0QZ24 198 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 M0R3H8 397 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 TIMM23O14925 209 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 POLR3GO15318 223 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-211ENST00000528484 SNNO75324 88 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-211ENST00000528484 GPANK1O95872 356 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 MMP7P09237 267 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-211ENST00000528484 PPIAL4GP0DN37 164 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 ACADSP16219 412 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF32P17041 273 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 MDKP21741 143 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-211ENST00000528484 CPT2P23786 658 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 SLC6A9P48067 706 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 MRPS34P82930 218 aaKnown RBP9.75□□□□□ -0.85
CMTM1-211ENST00000528484 NPTX1Q15818 432 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 C10orf128Q5T292 105 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 LRIF1Q5T3J3 769 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 BRICD5Q6PL45 260 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 LRRN1Q6UXK5 716 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF101Q8IZC7 436 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 C11orf65Q8NCR3 313 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 SLC26A7Q8TE54 656 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 ADAMTS16Q8TE57 1224 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 UBE2FQ969M7 185 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 SPDL1Q96EA4 605 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 PLEKHA8Q96JA3 519 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 POM121L2Q96KW2 1035 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 SAMD8Q96LT4 415 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 MAGEB18Q96M61 343 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF48Q96MX3 618 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-211ENST00000528484 SMURF2Q9HAU4 748 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 MSL2Q9HCI7 577 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 MAN2C1Q9NTJ4 1040 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 KIF17Q9P2E2 1029 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 PPP1R3CQ9UQK1 317 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 LRCH1Q9Y2L9 728 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 MMP24Q9Y5R2 645 aa9.75□□□□□ -0.85
CMTM1-211ENST00000528484 A8MXK9 166 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 TRAPPC2LH3BP13 241 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 IFNL4K9M1U5 179 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 TPST2O60704 377 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 TRMUO75648 421 aaKnown RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 ASAH2BP0C7U1 165 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 CD247P20963 164 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 TUBG1P23258 451 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 MDH2P40926 338 aaKnown RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 WNT5AP41221 380 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 ERVK-25P63136 954 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 HIST3H3Q16695 136 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 CYP51A1Q16850 503 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 KLF17Q5JT82 389 aaPredicted RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 FAM205BPQ63HN1 556 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 LINC00114Q6XXX2 140 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 LRRC28Q86X40 367 aaPredicted RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 SLC30A8Q8IWU4 369 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 MREGQ8N565 214 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF283Q8N7M2 679 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 NPEPL1Q8NDH3 523 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 OR2Z1Q8NG97 314 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 AKR7LQ8NHP1 331 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 VANGL1Q8TAA9 524 aaPredicted RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 FNDC8Q8TC99 324 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 RASSF5Q8WWW0 418 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 ASB10Q8WXI3 467 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 NSMAFQ92636 917 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 C1orf147Q96MC9 270 aaPredicted RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 OR52B2Q96RD2 323 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 ARHGDIGQ99819 225 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 SLC30A2Q9BRI3 323 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 MRPL13Q9BYD1 178 aaKnown RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 MMP27Q9H306 513 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 TUBG2Q9NRH3 451 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 INIPQ9NRY2 104 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 NKIRAS1Q9NYS0 192 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 SLC25A37Q9NYZ2 338 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 CCDC167Q9P0B6 97 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 NDRG4Q9ULP0 352 aaKnown RBP9.74□□□□□ -0.85
CMTM1-211ENST00000528484 SLC7A7Q9UM01 511 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 NOTCH1P46531 2555 aa9.74□□□□□ -0.85
CMTM1-211ENST00000528484 SLC2A10O95528 541 aa9.73□□□□□ -0.85
CMTM1-211ENST00000528484 ABHD16AO95870 558 aa9.73□□□□□ -0.85
CMTM1-211ENST00000528484 F13BP05160 661 aa9.73□□□□□ -0.85
CMTM1-211ENST00000528484 RPS2P15880 293 aaKnown RBP9.73□□□□□ -0.85
CMTM1-211ENST00000528484 OMGP23515 440 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms