RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 H7C417 338 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 IL5P05113 134 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 CSF1P09603 554 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 MECP2P51608 486 aaKnown RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 HSF1Q00613 529 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 MELKQ14680 651 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 TMEM244Q5VVB8 128 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 SFRP4Q6FHJ7 346 aaPredicted RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 LAMTOR1Q6IAA8 161 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 C9orf62Q8N4C0 152 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 DNAAF1Q8NEP3 725 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 OR11G2Q8NGC1 345 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 OR51A4Q8NGJ6 313 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 DNAJA3Q96EY1 480 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 RADILQ96JH8 1075 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 C5orf34Q96MH7 638 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 WDR77Q9BQA1 342 aaPredicted RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 CRB3Q9BUF7 120 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 GPN1Q9HCN4 374 aaPredicted RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 MED11Q9P086 117 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 MTFP1Q9UDX5 166 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 NXT1Q9UKK6 140 aaKnown RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 HHLA2Q9UM44 414 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 GTF2A1LQ9UNN4 478 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 ADAMTS9Q9P2N4 1935 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 A0A1W2PQM1 296 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 GGT3PA6NGU5 568 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 TMEM200CA6NKL6 621 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 SIGLEC6O43699 453 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 GMDSO60547 372 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 PNPP00491 289 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 DCNP07585 359 aaKnown RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 FBXO45P0C2W1 286 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 IFNGR1P15260 489 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 ETFDHQ16134 617 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 TMEM225Q6GV28 225 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 OR5M10Q6IEU7 315 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 OR7E24Q6IFN5 339 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 FAM166AQ6J272 317 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 MTFR2Q6P444 385 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 NDUFAF7Q7L592 441 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 THAP3Q8WTV1 239 aaPredicted RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 ASB5Q8WWX0 329 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 FAM3DQ96BQ1 224 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 RBP7Q96R05 134 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 METTL7AQ9H8H3 244 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 WDR54Q9H977 334 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 MYOTQ9UBF9 498 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 KLK11Q9UBX7 282 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 SLC22A13Q9Y226 551 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 RPH3AQ9Y2J0 694 aaPredicted RBP13.32□□□□□ -0.28
NUP54-217ENST00000514987 NPTNQ9Y639 398 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 A0A0A6YYH2 397 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 LY6G6EA0A0G2JKS1 128 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 A0A1W2PPC1 479 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 A6NJ64 397 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 SNRPGP15A8MWD9 76 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 SULT1C2O00338 296 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 SRSF10O75494 262 aaKnown RBP13.31□□□□□ -0.28
NUP54-217ENST00000514987 CTAG2O75638 210 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 ALX3O95076 343 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 NDUFB6O95139 128 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 TIAF1O95411 115 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 UBCP0CG48 685 aaKnown RBP13.31□□□□□ -0.28
NUP54-217ENST00000514987 FOSL2P15408 326 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
NUP54-217ENST00000514987 DCTDP32321 178 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 POU3F4P49335 361 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 FOXF1Q12946 379 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 ODF4Q2M2E3 257 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 C16orf47Q6ZP98 133 aaPredicted RBP13.31□□□□□ -0.28
NUP54-217ENST00000514987 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.31□□□□□ -0.28
NUP54-217ENST00000514987 FAM109AQ8N4B1 249 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 OR10H5Q8NGA6 315 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 OR6M1Q8NGM8 313 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 ATOH1Q92858 354 aaPredicted RBP13.31□□□□□ -0.28
NUP54-217ENST00000514987 FOXRED1Q96CU9 486 aaPredicted RBP13.31□□□□□ -0.28
NUP54-217ENST00000514987 GPR137Q96N19 417 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 NOX3Q9HBY0 568 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 ZFP64Q9NPA5 681 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 NKIRAS2Q9NYR9 191 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 KLHL13Q9P2N7 655 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 PILRBQ9UKJ0 227 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 MGAT4AQ9UM21 535 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 WIF1Q9Y5W5 379 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 U3KQA8 63 aa13.31□□□□□ -0.28
NUP54-217ENST00000514987 ASXL3Q9C0F0 2248 aa13.3□□□□□ -0.28
NUP54-217ENST00000514987 SMLR1H3BR10 107 aa13.3□□□□□ -0.28
NUP54-217ENST00000514987 ICMTO60725 284 aa13.3□□□□□ -0.28
NUP54-217ENST00000514987 ZNF354AO60765 605 aaPredicted RBP13.3□□□□□ -0.28
NUP54-217ENST00000514987 FGF5P12034 268 aa13.3□□□□□ -0.28
NUP54-217ENST00000514987 HLA-DOBP13765 273 aa13.3□□□□□ -0.28
NUP54-217ENST00000514987 CPN1P15169 458 aa13.3□□□□□ -0.28
NUP54-217ENST00000514987 DNASE1L1P49184 302 aa13.3□□□□□ -0.28
NUP54-217ENST00000514987 POU3F1Q03052 451 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms