RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 DNAH3Q8TD57 4116 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 KRTAP9-6A0A140TA67 174 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 A0A1B0GW55 424 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 A0A1W2PRD5 423 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 MEIOCA2RUB1 952 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ZSCAN5BA6NJL1 495 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUXAA6NLW8 204 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 A8MVM7 634 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 TMEM178BH3BS89 294 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 STX16-NPEPL1H3BU86 382 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 H3BUX3 64 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 IFNL4K9M1U5 179 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 F2RL2O00254 374 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DNALI1O14645 258 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 STX16O14662 325 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PHYHO14832 338 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 CFLARO15519 480 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 CRCPO75575 148 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 SLC22A3O75751 556 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 URI1O94763 535 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 AHSA1O95433 338 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 AK1P00568 194 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 OPN1SWP03999 348 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PLA2G1BP04054 148 aaKnown RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 CD55P08174 381 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 RBP1P09455 135 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PATE4P0C8F1 98 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUX4L2P0CJ85 424 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUX4L3P0CJ86 424 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUX4L5P0CJ88 424 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUX4L6P0CJ89 424 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUX4L7P0CJ90 424 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PAICSP22234 425 aaKnown RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 SLC6A2P23975 617 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 CCT3P49368 545 aaKnown RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 NPY4RP50391 375 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 MMP15P51511 669 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ARHGDIAP52565 204 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 KCNJ10P78508 379 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 HPCAP84074 193 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PAX2Q02962 417 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 HSF2Q03933 536 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 COX10Q12887 443 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 MFSD13AQ14CX5 517 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ZKSCAN8Q15776 578 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 SLC36A2Q495M3 483 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 C19orf54Q5BKX5 351 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 TCTEX1D4Q5JR98 221 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ATAD3BQ5T9A4 648 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 IL23RQ5VWK5 629 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 WDR25Q64LD2 544 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 ANKRD26P1Q6NSI1 321 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 CAVIN1Q6NZI2 390 aaKnown RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 TTC27Q6P3X3 843 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUX4L9Q6RFH8 374 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 CCDC91Q7Z6B0 441 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PIGWQ7Z7B1 504 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 LRRC8AQ8IWT6 810 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PQLC1Q8N2U9 271 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 CADM2Q8N3J6 435 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ZNF283Q8N7M2 679 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ATG16L2Q8NAA4 619 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 OR56A1Q8NGH5 318 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 VANGL1Q8TAA9 524 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 PYROXD1Q8WU10 500 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 RAB24Q969Q5 203 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DACT3Q96B18 629 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 FAM120BQ96EK7 910 aaKnown RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 OXGR1Q96P68 337 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 SDF2Q99470 211 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ACPTQ9BZG2 426 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ULBP2Q9BZM5 246 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DPY30Q9C005 99 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PCDHAC1Q9H158 963 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 MEGF9Q9H1U4 602 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 MMADHCQ9H3L0 296 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 RANBP3Q9H6Z4 567 aaPredicted RBP3.16□□□□□ -1.9
RNF4-211ENST00000509206 MSL2Q9HCI7 577 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ZNRD1Q9P1U0 126 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 DUX4Q9UBX2 424 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 ATP6V1HQ9UI12 483 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 PCTPQ9UKL6 214 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 MKLN1Q9UL63 735 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 MAB21L2Q9Y586 359 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 TEX264Q9Y6I9 313 aa3.16□□□□□ -1.9
RNF4-211ENST00000509206 A0A1B0GVI7 797 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 NPIPB9F8W1W9 429 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 H3BUI4 141 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 PPP6CO00743 305 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 FCMRO60667 390 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 SEC22BO75396 215 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 SUPT7LO94864 414 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 KLHL2O95198 593 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 CYB5R3P00387 301 aaPredicted RBP3.15□□□□□ -1.91
RNF4-211ENST00000509206 ALDOBP05062 364 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 C2P06681 752 aa3.15□□□□□ -1.91
RNF4-211ENST00000509206 ADH4P08319 380 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms