RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PRAMEF17Q5VTA0 474 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 FAM198BQ6UWH4 519 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 C3P1Q6ZMU1 363 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 HIST3H2AQ7L7L0 130 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-220ENST00000482507 TSEN15Q8WW01 171 aaKnown RBP13.39□□□□□ -0.27
ATG4B-220ENST00000482507 HIST1H2ACQ93077 130 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 PTDSS2Q9BVG9 487 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 REG4Q9BYZ8 158 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 LAT2Q9GZY6 243 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 SOHLH2Q9NX45 425 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 OPN4Q9UHM6 478 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 NUP50Q9UKX7 468 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 PLCL2Q9UPR0 1127 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 TMEM272A0A1B0GTI8 110 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 ZNF432O94892 652 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 IGKV3-11P04433 115 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 RLN1P04808 185 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 RAB14P61106 215 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 INSM1Q01101 510 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-220ENST00000482507 RASGEF1BQ0VAM2 473 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 SLC17A1Q14916 467 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 RBMS2Q15434 407 aaKnown RBP13.39□□□□□ -0.27
ATG4B-220ENST00000482507 TCEAL6Q6IPX3 200 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 MUC20Q8N307 709 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-220ENST00000482507 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 ZNF721Q8TF20 911 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 TCEAL3Q969E4 200 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 SLC25A36Q96CQ1 311 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 OMA1Q96E52 524 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 OR8B4Q96RC9 309 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 TMPRSS13Q9BYE2 586 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 B9D1Q9UPM9 204 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 FRG2CA6NGY1 282 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 OR6C65A6NJZ3 312 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 CD3DP04234 171 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 ACSM4P0C7M7 580 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 ZNF35P13682 527 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 CSF2RBP32927 897 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 HLXQ14774 488 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-220ENST00000482507 ACKR1Q16570 336 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 HLA-BQ31612 363 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 FAM166AQ6J272 317 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 GKN2Q86XP6 184 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 PLPP7Q8NBV4 271 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 C15orf40Q8WUR7 153 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 RBPMSQ93062 196 aaKnown RBP13.38□□□□□ -0.27
ATG4B-220ENST00000482507 PNPLA2Q96AD5 504 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 FAM3DQ96BQ1 224 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 ZC3H10Q96K80 434 aaKnown RBP13.38□□□□□ -0.27
ATG4B-220ENST00000482507 CXorf58Q96LI9 332 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 SLC46A1Q96NT5 459 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 NUDT9Q9BW91 350 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 WDFY3Q8IZQ1 3526 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 PCNX3Q9H6A9 2034 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 HLA-DQA2P01906 255 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 CFPP27918 469 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 CENPAP49450 140 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 SCAND1P57086 179 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 SEC61A1P61619 476 aaKnown RBP13.38□□□□□ -0.27
ATG4B-220ENST00000482507 TRIM61Q5EBN2 209 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 FDX2Q6P4F2 183 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 OR8S1Q8NH09 359 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 MNTQ99583 582 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 RDH8Q9NYR8 311 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 GTF2A1LQ9UNN4 478 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 TMEM14AQ9Y6G1 99 aa13.38□□□□□ -0.27
ATG4B-220ENST00000482507 LMO7DNF2Z398 122 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 ARPC5O15511 151 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 DOK2O60496 412 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 TPPPO94811 219 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 GTF2F2P13984 249 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 CTLA4P16410 223 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 CXCR1P25024 350 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 RORAP35398 523 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 FASLGP48023 281 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 PPM1FP49593 454 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-220ENST00000482507 DLX5P56178 289 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 TTLL10Q6ZVT0 673 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 GPAT4Q86UL3 456 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 ADGRG3Q86Y34 549 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 C9orf40Q8IXQ3 194 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 OR6N1Q8NGY5 312 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 ZNF519Q8TB69 540 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 SLC25A28Q96A46 364 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 C8orf44Q96CB5 159 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 DMRTA2Q96SC8 542 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 KCNMB2Q9Y691 235 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 IGKV3D-11A0A0A0MRZ8 115 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 IGLV1-36A0A0B4J1U3 117 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 PRSS37A4D1T9 235 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 FITM1A5D6W6 292 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 POM121CA8CG34 1229 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 H0YIG0 161 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 SLC17A2O00624 439 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 GOSR2O14653 212 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 SLC16A7O60669 478 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms