RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CCDC126Q96EE4 140 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ITCHQ96J02 903 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 POM121L2Q96KW2 1035 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 IL17FQ96PD4 163 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 SDHCQ99643 169 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 SLC35A5Q9BS91 424 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ZNF2Q9BSG1 426 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 SLC25A33Q9BSK2 321 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 DDA1Q9BW61 102 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ZNF717Q9BY31 904 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 UGT2B28Q9BY64 529 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 CSTL1Q9H114 145 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 MFSD1Q9H3U5 465 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 GLIPR2Q9H4G4 154 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 C11orf49Q9H6J7 331 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 RNF121Q9H920 327 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 RHOFQ9HBH0 211 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 CUTCQ9NTM9 273 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 FGFR1OP2Q9NVK5 253 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 CLN6Q9NWW5 311 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 IMPAD1Q9NX62 359 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 RNF186Q9NXI6 227 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 CIDEBQ9UHD4 219 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ZNF225Q9UK10 706 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 SPATA31D1Q6ZQQ2 1576 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ARHGEF10O15013 1369 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 A0A0B4J2E0 115 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GLYATL1P3A0A0U1RQE8 302 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 KIR2DS1A0A191URI9 304 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 A0A1B0GW55 424 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 A0A1B0GX12 115 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 ASPDHA6ND91 283 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 A8MVM7 634 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 CXCR6O00574 342 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 BET1O15155 118 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 SURF4O15260 269 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 SLC31A1O15431 190 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 PRKNO60260 465 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 ZIC3O60481 467 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 HPGDSO60760 199 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GAGE7O76087 117 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GLSO94925 669 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 APOC1P02654 83 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 PPBPP02775 128 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 IGKV2-30P06310 120 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 H2BFMP0C1H6 154 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4L2P0CJ85 424 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4L3P0CJ86 424 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4L4P0CJ87 422 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4L5P0CJ88 424 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4L6P0CJ89 424 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4L7P0CJ90 424 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GAGE12FP0CL80 117 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GAGE12GP0CL81 117 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GAGE12IP0CL82 117 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 PRSS56P0CW18 603 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 UCHL3P15374 230 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GATA1P15976 413 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 UGT2B7P16662 529 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 IGFBP5P24593 272 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 RPS12P25398 132 aaKnown RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 ADORA1P30542 326 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 HTR1FP30939 366 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 SSTR5P35346 364 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DCTP40126 519 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 LEPP41159 167 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GLP1RP43220 463 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 KIR2DS4P43632 304 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 OR3A3P47888 321 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 ZNF121P58317 390 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 B3GALT5-AS1P59052 145 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 RPL19P84098 196 aaKnown RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 HMGCS1Q01581 520 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GAGE1Q13065 139 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GAGE4Q13068 117 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 ITPK1Q13572 414 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 KIR2DS1Q14954 304 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 PHKG1Q16816 387 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TMEM176BQ3YBM2 270 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 ZNF260Q3ZCT1 412 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 LRRC37A5PQ49AS3 106 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 RESP18Q5W5W9 173 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 LPCAT4Q643R3 524 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 AWAT2Q6E213 333 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TCEAL6Q6IPX3 200 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 PWWP2BQ6NUJ5 590 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 MED27Q6P2C8 311 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 FAHD2BQ6P2I3 314 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 DHRS4L2Q6PKH6 230 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4L9Q6RFH8 374 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 RAD9BQ6WBX8 426 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 IDO2Q6ZQW0 420 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 C9orf47Q6ZRZ4 202 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 SLC25A48Q6ZT89 311 aaKnown RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 ASRGL1Q7L266 308 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 SSX7Q7RTT5 188 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 RCOR2Q8IZ40 523 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 OR1M1Q8NGA1 313 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 OR51D1Q8NGF3 324 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 OR5B3Q8NH48 314 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms