RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 CRB3Q9BUF7 120 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 COPZ2Q9P299 210 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 NPIPA1Q9UND3 350 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 EMC9Q9Y3B6 208 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 TMEM265A0A087WTH1 108 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 MEIS3P1A6NDR6 274 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 EIF1AYO14602 144 aaKnown RBP12.62□□□□□ -0.39
UBXN11-214ENST00000475591 LMX1BO60663 402 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 PDGFBP01127 241 aaPredicted RBP12.62□□□□□ -0.39
UBXN11-214ENST00000475591 FOSL2P15408 326 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 POU3F4P49335 361 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 RIDAP52758 137 aaKnown RBP12.62□□□□□ -0.39
UBXN11-214ENST00000475591 GALK2Q01415 458 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 GUCA2AQ02747 115 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 ROM1Q03395 351 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 TLE3Q04726 772 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 Q6ZTK2 550 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 PLCZ1Q86YW0 608 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 MISPQ8IVT2 679 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 C9orf62Q8N4C0 152 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 ZNF248Q8NDW4 579 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 SLC26A10Q8NG04 563 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 OR52N5Q8NH56 324 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 GRPEL2Q8TAA5 225 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 C5orf34Q96MH7 638 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 GAL3ST1Q99999 423 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 ETV7Q9Y603 341 aa12.62□□□□□ -0.39
UBXN11-214ENST00000475591 ANKRD20A5PA0PJZ0 165 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 ARPC1BO15143 372 aaKnown RBP12.61□□□□□ -0.39
UBXN11-214ENST00000475591 TSC22D2O75157 780 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 GLSO94925 669 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-214ENST00000475591 PTGDSP41222 190 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 ZP1P60852 638 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 PHF19Q5T6S3 580 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 H1FNTQ75WM6 255 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-214ENST00000475591 CATSPERDQ86XM0 798 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 OR56B4Q8NH76 319 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 TAS2R4Q9NYW5 299 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 PPP4R1LQ9P1A2 415 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 VSTM2BA6NLU5 285 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 SSNA1O43805 119 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 ALDOBP05062 364 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 CELA2AP08217 269 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 CRABP1P29762 137 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 EIF1AXP47813 144 aaKnown RBP12.61□□□□□ -0.39
UBXN11-214ENST00000475591 HSF1Q00613 529 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 LINC00303Q3SY05 128 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 KCTD18Q6PI47 426 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-214ENST00000475591 LYPD8Q6UX82 237 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 OR51A2Q8NGJ7 313 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 MFSD8Q8NHS3 518 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 MAFAQ8NHW3 353 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-214ENST00000475591 POC1BQ8TC44 478 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 ASB5Q8WWX0 329 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 CDX2Q99626 313 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-214ENST00000475591 CHST11Q9NPF2 352 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 MYOTQ9UBF9 498 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 FBXL2Q9UKC9 423 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
UBXN11-214ENST00000475591 SULT1B1O43704 296 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 PEX14O75381 377 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 SRSF10O75494 262 aaKnown RBP12.6□□□□□ -0.39
UBXN11-214ENST00000475591 CTAG2O75638 210 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 ANXA3P12429 323 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 PSMB1P20618 241 aaKnown RBP12.6□□□□□ -0.39
UBXN11-214ENST00000475591 PTGS2P35354 604 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 APOBEC1P41238 236 aaKnown RBP12.6□□□□□ -0.39
UBXN11-214ENST00000475591 LRFN4Q6PJG9 635 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 SEC22CQ9BRL7 303 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 MYEF2Q9P2K5 600 aaKnown RBP12.6□□□□□ -0.39
UBXN11-214ENST00000475591 CGGBP1Q9UFW8 167 aaPredicted RBP12.6□□□□□ -0.39
UBXN11-214ENST00000475591 MGAT4AQ9UM21 535 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 PPIEQ9UNP9 301 aaKnown RBP12.6□□□□□ -0.39
UBXN11-214ENST00000475591 ADAMTS9Q9P2N4 1935 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 HSPB2A8KAH6 182 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 ACOT7O00154 380 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 ECDO95905 644 aaPredicted RBP12.6□□□□□ -0.39
UBXN11-214ENST00000475591 PNLIPP16233 465 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 ZNF28P17035 718 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 RAD52P43351 418 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 BIDP55957 195 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 HSPB2Q16082 182 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 C2orf76Q3KRA6 126 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 TMEM225Q6GV28 225 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 ST7LQ8TDW4 575 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 DDIT4LQ96D03 193 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 HYLS1Q96M11 299 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 MRI1Q9BV20 369 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 GON7Q9BXV9 100 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 METTL7AQ9H8H3 244 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 EMC7Q9NPA0 242 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 STMN3Q9NZ72 180 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 SLC23A1Q9UHI7 598 aa12.6□□□□□ -0.39
UBXN11-214ENST00000475591 MED12Q93074 2177 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms