RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 TRIB1Q96RU8 372 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 PSD2Q9BQI7 771 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 ERVMER34-1Q9H9K5 563 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 NECAP2Q9NVZ3 263 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 BOLA1Q9Y3E2 137 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 ACSM5Q6NUN0 579 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 ETFBKMTQ8IXQ9 262 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 PLPP6Q8IY26 295 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 OR6M1Q8NGM8 313 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 BSCL2Q96G97 398 aaPredicted RBP15.71■□□□□ 0.11
PTPRF-209ENST00000438120 BARHL1Q9BZE3 327 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 SLC39A9Q9NUM3 307 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 B3GAT1Q9P2W7 334 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 TRDV1A0A1B0GX56 115 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 OR2A25A4D2G3 310 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 SPINT2O43291 252 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 DPTQ07507 201 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.71■□□□□ 0.11
PTPRF-209ENST00000438120 PLPP5Q8NEB5 264 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 OR52N1Q8NH53 320 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 HEYLQ9NQ87 328 aaPredicted RBP15.71■□□□□ 0.11
PTPRF-209ENST00000438120 CHST2Q9Y4C5 530 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 TRABD2BA6NFA1 517 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 PIPP12273 146 aaPredicted RBP15.71■□□□□ 0.11
PTPRF-209ENST00000438120 NPBWR1P48145 328 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 CA13Q8N1Q1 262 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 GNB4Q9HAV0 340 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 CHST11Q9NPF2 352 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 C9orf50Q5SZB4 431 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 OR8G2PQ6IF36 304 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 OR51S1Q8NGJ8 323 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 TNFRSF12AQ9NP84 129 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 SLC25A37Q9NYZ2 338 aa15.71■□□□□ 0.11
PTPRF-209ENST00000438120 ATP1B1P05026 303 aa15.71■□□□□ 0.1
PTPRF-209ENST00000438120 CD22P20273 847 aa15.71■□□□□ 0.1
PTPRF-209ENST00000438120 ACKR1Q16570 336 aa15.71■□□□□ 0.1
PTPRF-209ENST00000438120 ASIC5Q9NY37 505 aa15.71■□□□□ 0.1
PTPRF-209ENST00000438120 OR6C65A6NJZ3 312 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 RPL11P62913 178 aaKnown RBP15.7■□□□□ 0.1
PTPRF-209ENST00000438120 IHHQ14623 411 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 TMPRSS7Q7RTY8 843 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 DEFB108BQ8NET1 73 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 MENTQ9BUN1 341 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 PARP12Q9H0J9 701 aaKnown RBP15.7■□□□□ 0.1
PTPRF-209ENST00000438120 TAS2R5Q9NYW4 299 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 TMEM265A0A087WTH1 108 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 FAPQ12884 760 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 NANOGP1Q8N7R0 232 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 FAM212BQ9NTI7 297 aaPredicted RBP15.7■□□□□ 0.1
PTPRF-209ENST00000438120 LOC107986453A0A1B0GWG9 222 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 AQP7O14520 342 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 FOLR1P15328 257 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 HBG1P69891 147 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 HBG2P69892 147 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 DMRTC1Q5HYR2 192 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 LPCAT3Q6P1A2 487 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 ANKRD16Q6P6B7 361 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 TMEM81Q6P7N7 255 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 TRILQ7L0X0 811 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 ETV7Q9Y603 341 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 LRRC30A6NM36 301 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 OR8G1Q15617 311 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 CD300LGQ6UXG3 332 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 UHRF2Q96PU4 802 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 MED29Q9NX70 200 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 OR2J2O76002 312 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 SBK2P0C263 348 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 CBR1P16152 277 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 SLC6A12P48065 614 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 SNRPGP62308 76 aaKnown RBP15.7■□□□□ 0.1
PTPRF-209ENST00000438120 RUNX2Q13950 521 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 MRPL58Q14197 206 aaKnown RBP15.7■□□□□ 0.1
PTPRF-209ENST00000438120 KCNIP4Q6PIL6 250 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 MDGA2Q7Z553 956 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 DPPA2Q7Z7J5 298 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 NKAIN3Q8N8D7 197 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 PRELID3BQ9Y3B1 194 aa15.7■□□□□ 0.1
PTPRF-209ENST00000438120 CLEC3BP05452 202 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 C16orf52Q8NHV5 167 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 ARRDC1-AS1Q9H2J1 176 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 CNIH1O95406 144 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 ETHE1O95571 254 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 RNF4P78317 190 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 GALEQ14376 348 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 SLAMF6Q96DU3 332 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 HINT3Q9NQE9 182 aaKnown RBP15.69■□□□□ 0.1
PTPRF-209ENST00000438120 hCG_1809904A0A1W2PP81 198 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 A0A1W2PPE2 198 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 A0A1W2PR64 198 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 A0A1W2PRV1 198 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 C2CD4DB7Z1M9 353 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 PPIAP62937 165 aaKnown RBP15.69■□□□□ 0.1
PTPRF-209ENST00000438120 IL34Q6ZMJ4 242 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 OR13C5Q8NGS8 318 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 MBOAT4Q96T53 435 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 OR52A5Q9H2C5 316 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 SOD1P00441 154 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 RAB11AP62491 216 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 FAM219BQ5XKK7 198 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 SLC35B4Q969S0 331 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms