RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LRRN1Q6UXK5 716 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PAQR4Q8N4S7 273 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NPEPL1Q8NDH3 523 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NOXO1Q8NFA2 376 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 VANGL1Q8TAA9 524 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLC25A40Q8TBP6 338 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 C4orf45Q96LM5 186 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF347Q96SE7 839 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CCDC28BQ9BUN5 200 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 OR2J1Q9GZK6 312 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 POLR2J2Q9GZM3 115 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 POLR2J3Q9H1A7 115 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TMEM106BQ9NUM4 274 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 VAPAQ9P0L0 249 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 LEF1Q9UJU2 399 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NDRG4Q9ULP0 352 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NDUFAF1Q9Y375 327 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ANGPT2O15123 496 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TRMUO75648 421 aaKnown RBP10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 UBOX5O94941 541 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MT-ND1P03886 318 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 F13BP05160 661 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CD55P08174 381 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ASAH2BP0C7U1 165 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZNF32P17041 273 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RBM34P42696 430 aaKnown RBP10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MMP15P51511 669 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 WDR4P57081 412 aaKnown RBP10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TAS2R41P59536 307 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 HIST3H3Q16695 136 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DUSP7Q16829 419 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SPATA46Q5T0L3 261 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 C10orf128Q5T292 105 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 FAM27BQ5VT28 67 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 C17orf107Q6ZR85 190 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SYT9Q86SS6 491 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LSRQ86X29 649 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OR6T1Q8NGN1 323 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LRRC8CQ8TDW0 803 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 NSMAFQ92636 917 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DVL3Q92997 716 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SGTBQ96EQ0 304 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MARS2Q96GW9 593 aaKnown RBP10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ARHGDIGQ99819 225 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SH3GL1Q99961 368 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SLC30A2Q9BRI3 323 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PARD6BQ9BYG5 372 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 NDEL1Q9GZM8 345 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 BEX1Q9HBH7 125 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ESM1Q9NQ30 184 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SLC25A37Q9NYZ2 338 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 BAG5Q9UL15 447 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CUBNO60494 3623 aa10.39□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DNAJC9-AS1A6NH13 148 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LRRC30A6NM36 301 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CLDN34H7C241 214 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TPST2O60704 377 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 KNG1P01042 644 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RNASE1P07998 156 aaKnown RBP10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CST2P09228 141 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MMP7P09237 267 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PCGF2P35227 344 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SLC6A9P48067 706 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 BPIFB3P59826 476 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PSG4Q00888 419 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RUNDC3AQ59EK9 446 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TNFAIP8L3Q5GJ75 292 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 FAM205BPQ63HN1 556 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 C16orf87Q6PH81 154 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LRRC28Q86X40 367 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PTOV1Q86YD1 416 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OR5L1Q8NGL2 311 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 IPCEF1Q8WWN9 437 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LRRC58Q96CX6 371 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 POM121L2Q96KW2 1035 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ALG12Q9BV10 488 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MRPL13Q9BYD1 178 aaKnown RBP10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SLAMF8Q9P0V8 285 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZNF69Q9UC07 566 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MIOXQ9UGB7 285 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 IL19Q9UHD0 177 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OPN4Q9UHM6 478 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LRCH1Q9Y2L9 728 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MED31Q9Y3C7 131 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 INSIG2Q9Y5U4 225 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CACNG2Q9Y698 323 aa10.38□□□□□ -0.75
HLA-DQB3-203ENST00000425319 A6NIZ1 184 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OR7A10O76100 309 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ABHD16AO95870 558 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 IGF2P01344 180 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PPIAL4GP0DN37 164 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZNF12P17014 697 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MDH2P40926 338 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 UGT2B15P54855 530 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RAP1BP61224 184 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MAGOHP61326 146 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 BTG1P62324 171 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms