RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ADRA2AP08913 450 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 CST2P09228 141 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 STOMP27105 288 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 APLNRP35414 380 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 EVX1P49640 407 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 TRIM25Q14258 630 aaKnown RBP12.57□□□□□ -0.4
ERCC1-203ENST00000340192 MTX3Q5HYI7 312 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 GPR139Q6DWJ6 353 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 LCN8Q6JVE9 175 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 SMARCD3Q6STE5 483 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 DPY19L2P2Q6ZN68 376 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 LRP11Q86VZ4 500 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 DHFR2Q86XF0 187 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 OR1J2Q8NGS2 313 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 FANK1Q8TC84 345 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 LRMDAQ9H2I8 198 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 OR51B6Q9H340 312 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 MUC13Q9H3R2 512 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 TMCC3Q9ULS5 477 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 IER3IP1Q9Y5U9 82 aa12.57□□□□□ -0.4
ERCC1-203ENST00000340192 YLPM1P49750 1951 aaKnown RBP12.57□□□□□ -0.4
ERCC1-203ENST00000340192 SOCS2O14508 198 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 SYNGR3O43761 229 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 SCG5P05408 212 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 ERCC1P07992 297 aaPredicted RBP12.56□□□□□ -0.4
ERCC1-203ENST00000340192 IGFBP1P08833 259 aaPredicted RBP12.56□□□□□ -0.4
ERCC1-203ENST00000340192 SLC25A16P16260 332 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 CTLA4P16410 223 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 MSR1P21757 451 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 CCNOP22674 350 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 FPR3P25089 353 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 IFNGR2P38484 337 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 PDLIM4P50479 330 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 RPS6KA3P51812 740 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 PCBD1P61457 104 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 PSG4Q00888 419 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 MS4A2Q01362 244 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 ENDOGQ14249 297 aaKnown RBP12.56□□□□□ -0.4
ERCC1-203ENST00000340192 CARTPTQ16568 116 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 RGS7BPQ6MZT1 257 aaPredicted RBP12.56□□□□□ -0.4
ERCC1-203ENST00000340192 ADCK1Q86TW2 530 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 AKR7LQ8NHP1 331 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 BCAS4Q8TDM0 211 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 CLPTM1LQ96KA5 538 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 FOXN4Q96NZ1 517 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 ZNF416Q9BWM5 594 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 OR2H1Q9GZK4 316 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 WNT5BQ9H1J7 359 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 C1orf21Q9H246 121 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 SYT4Q9H2B2 425 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 MYOZ1Q9NP98 299 aaPredicted RBP12.56□□□□□ -0.4
ERCC1-203ENST00000340192 POLE4Q9NR33 117 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 TAS2R1Q9NYW7 299 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 MYEF2Q9P2K5 600 aaKnown RBP12.56□□□□□ -0.4
ERCC1-203ENST00000340192 DUSP13Q9UII6 198 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 PRPF19Q9UMS4 504 aaKnown RBP12.56□□□□□ -0.4
ERCC1-203ENST00000340192 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
ERCC1-203ENST00000340192 LOC100509620A0A075B734 347 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 C5orf49A4QMS7 147 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 M0R233 179 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 IMPA2O14732 288 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 KRT36O76013 467 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 PPP1R3DO95685 299 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 TXNDC12O95881 172 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
ERCC1-203ENST00000340192 LCKP06239 509 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 PCSK6P29122 969 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 RAD52P43351 418 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 ALDH3B1P43353 468 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 MAGEA2P43356 314 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 UCP2P55851 309 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 ERVS71-1P61550 626 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 MAD2L1BPQ15013 274 aaPredicted RBP12.55□□□□□ -0.4
ERCC1-203ENST00000340192 RFX4Q33E94 735 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 C1orf94Q6P1W5 598 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 UGT2A3Q6UWM9 527 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 PTCHD4Q6ZW05 846 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 TRPM8Q7Z2W7 1104 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 CCDC124Q96CT7 223 aaKnown RBP12.55□□□□□ -0.4
ERCC1-203ENST00000340192 POM121L2Q96KW2 1035 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 PIMREGQ9BSJ6 248 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 OR52D1Q9H346 318 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 TPK1Q9H3S4 243 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 RERGLQ9H628 205 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 MAGIXQ9H6Y5 334 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 EMC7Q9NPA0 242 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 VSX1Q9NZR4 365 aaPredicted RBP12.55□□□□□ -0.4
ERCC1-203ENST00000340192 REV1Q9UBZ9 1251 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 TIMM10BQ9Y5J6 103 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 LYVE1Q9Y5Y7 322 aa12.55□□□□□ -0.4
ERCC1-203ENST00000340192 FN1P02751 2386 aaKnown RBP12.55□□□□□ -0.4
ERCC1-203ENST00000340192 LOC390937A0A1W2PQ73 354 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 C12orf71A8MTZ7 269 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 VWC2LB2RUY7 222 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 INAFM1C9JVW0 142 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 NDUFS8O00217 210 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 TNFRSF11BO00300 401 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 SLC16A7O60669 478 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 APEHP13798 732 aaKnown RBP12.54□□□□□ -0.4
ERCC1-203ENST00000340192 DAOP14920 347 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms