RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 TUBAL3A6NHL2 446 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 B4DXG7 233 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 FFAR1O14842 300 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 CBFA2T3O75081 653 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 WBP4O75554 376 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 SULT1C4O75897 302 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 OR8G3PP0DMU2 310 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 PRKXP51817 358 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 OR8G1Q15617 311 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 THEM4Q5T1C6 240 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF574Q6ZN55 896 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF709Q8N972 641 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 SDR9C7Q8NEX9 313 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 GPR148Q8TDV2 347 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ITFG2Q969R8 447 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 WACQ9BTA9 647 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 PIGMQ9H3S5 423 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 APMAPQ9HDC9 416 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 MRPS18AQ9NVS2 196 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 NPIPB13A6NJU9 1138 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 RNF212BA8MTL3 300 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 NPIPB4C9JG80 1138 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 LSAMPQ13449 338 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 TPBGQ13641 420 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ST3GAL2Q16842 350 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ACSM5Q6NUN0 579 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF782Q6ZMW2 699 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 GLB1L2Q8IW92 636 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 FAM83FQ8NEG4 500 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 NEIL3Q8TAT5 605 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 TNFAIP8L1Q8WVP5 186 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 FAM71F1Q96KD3 344 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 MALT1Q9UDY8 824 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF850A8MQ14 1090 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 SOX3P41225 446 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ACAA2P42765 397 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 MFAP5Q13361 173 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 FAM198BQ6UWH4 519 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 OR56B2PQ8NGI1 322 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 OR5M9Q8NGP3 310 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 LIPHQ8WWY8 451 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 GPX7Q96SL4 187 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 TSPAN10Q9H1Z9 355 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 MOB1AQ9H8S9 216 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 HINT3Q9NQE9 182 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 FOXD3Q9UJU5 478 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 PRELID3BQ9Y3B1 194 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 A0A1W2PS29 197 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 M0R082 166 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PLATP00750 562 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 BMXP51813 675 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 SOX8P57073 446 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CLN3Q13286 438 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PLA2G2CQ5R387 149 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 TMEM81Q6P7N7 255 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PFN4Q8NHR9 129 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 FBLIM1Q8WUP2 373 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF587Q96SQ5 575 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 GAL3ST1Q99999 423 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC30A2Q9BRI3 323 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 TMED9Q9BVK6 235 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 IGHV1-45A0A0A0MS14 117 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 TRDV1A0A1B0GX56 115 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 FADS1O60427 444 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 AMY2BP19961 511 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 SNU13P55769 128 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 RPL18Q07020 188 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 EXOSC6Q5RKV6 272 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 DEGS2Q6QHC5 323 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 BTNL3Q6UXE8 466 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 GLRX5Q86SX6 157 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CYB561A3Q8NBI2 242 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PSMF1Q92530 271 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 SYT3Q9BQG1 590 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 SF3B5Q9BWJ5 86 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 METTL9Q9H1A3 318 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 NRIP3Q9NQ35 241 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF221Q9UK13 617 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 DLGAP1O14490 977 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CXCL13O43927 109 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 BPNT1O95861 308 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 DCAF10Q5QP82 559 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 C1orf185Q5T7R7 199 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 LIPKQ5VXJ0 399 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 OR52I1Q8NGK6 324 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 ZMYND19Q96E35 227 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 BARD1Q99728 777 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 ANGPTL4Q9BY76 406 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 ADAM19Q9H013 955 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 LIN28AQ9H9Z2 209 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 TRIM64BA6NI03 449 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 TMEM212A6NML5 194 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PIP5K1CO60331 668 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 WDR1O75083 606 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CD59P13987 128 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF44P15621 663 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PTNP21246 168 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 LIMK1P53667 647 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 MLLT10P55197 1068 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms