RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 LINC01356Q8N9X3 169 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 CPEB3Q8NE35 698 aaKnown RBP13.32□□□□□ -0.28
FOXR1-201ENST00000317011 NOXO1Q8NFA2 376 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 HDAC2Q92769 488 aaKnown RBP13.32□□□□□ -0.28
FOXR1-201ENST00000317011 RDH5Q92781 318 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 NABP1Q96AH0 204 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 HSH2DQ96JZ2 352 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 TXNIPQ9H3M7 391 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 CHODLQ9H9P2 273 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 STX18Q9P2W9 335 aaKnown RBP13.32□□□□□ -0.28
FOXR1-201ENST00000317011 RPS6KA6Q9UK32 745 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 SAMD4AQ9UPU9 718 aaKnown RBP13.32□□□□□ -0.28
FOXR1-201ENST00000317011 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 CLPTM1O96005 669 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 ACHEP22303 614 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 RAD52P43351 418 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 ZNF84P51523 738 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 MYBPC1Q00872 1141 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 CR1LQ2VPA4 569 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 FAM27BQ5VT28 67 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 RGS7BPQ6MZT1 257 aaPredicted RBP13.31□□□□□ -0.28
FOXR1-201ENST00000317011 CBLL1Q75N03 491 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 VTCN1Q7Z7D3 282 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 SPATA24Q86W54 205 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 FAM86B1Q8N7N1 296 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 SYT14Q8NB59 555 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 OR1J2Q8NGS2 313 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 ZNF519Q8TB69 540 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 LZICQ8WZA0 190 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 YIPF5Q969M3 257 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 MAN2C1Q9NTJ4 1040 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 DCAF13Q9NV06 445 aaKnown RBP13.31□□□□□ -0.28
FOXR1-201ENST00000317011 NKIRAS2Q9NYR9 191 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 ZNF346Q9UL40 294 aaKnown RBP13.31□□□□□ -0.28
FOXR1-201ENST00000317011 FZR1Q9UM11 496 aa13.31□□□□□ -0.28
FOXR1-201ENST00000317011 TCRBV5S2A0A599 114 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 FFAR1O14842 300 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 RP2O75695 350 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 IGHMP01871 453 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 NAT2P11245 290 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 CCL2P13500 99 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 APEX1P27695 318 aaKnown RBP13.3□□□□□ -0.28
FOXR1-201ENST00000317011 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
FOXR1-201ENST00000317011 KRTAP24-1Q3LI83 254 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 MTX3Q5HYI7 312 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 FOXL2NBQ6ZUU3 175 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 FKBP9P1Q75LS8 142 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 BPIFA2Q96DR5 249 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 PRRC1Q96M27 445 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 SNX18Q96RF0 628 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 ALG12Q9BV10 488 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 BCL2L14Q9BZR8 327 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 RNF121Q9H920 327 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 TAAR3PQ9P1P4 343 aa13.3□□□□□ -0.28
FOXR1-201ENST00000317011 C17orf100A8MU93 164 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 MCIDASD6RGH6 385 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 ICMTO60725 284 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 NCR1O76036 304 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 PRSS23O95084 383 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 FAM157BP0CG42 384 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 MAKP20794 623 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 CDAP32320 146 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 DVL1P1P54792 670 aaPredicted RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 RPL27P61353 136 aaKnown RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 PLP2Q04941 152 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 PRKCDQ05655 676 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 CCNIQ14094 377 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 KPNB1Q14974 876 aaKnown RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 ANKDD1AQ495B1 522 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 IFI44LQ53G44 452 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 ALG10Q5BKT4 473 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 THEM4Q5T1C6 240 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 IL17RELQ6ZVW7 336 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 RNF113BQ8IZP6 322 aaKnown RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 LRRC18Q8N456 261 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 SYNPRQ8TBG9 265 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 C11orf40Q8WZ69 217 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 RSRC1Q96IZ7 334 aaKnown RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 HINT3Q9NQE9 182 aaKnown RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 ZNF275Q9NSD4 429 aaPredicted RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 SLCO1C1Q9NYB5 712 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 TMEFF2Q9UIK5 374 aaPredicted RBP13.29□□□□□ -0.28
FOXR1-201ENST00000317011 ANK2Q01484 3957 aa13.29□□□□□ -0.28
FOXR1-201ENST00000317011 LOC100509620A0A075B734 347 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 IQCMA0A1B0GVH7 501 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 AQP12BA6NM10 295 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 B4DSR2 109 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 WNT9BO14905 357 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 PIP5K1CO60331 668 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 SLC2A10O95528 541 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 HNF1AP20823 631 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 MAGEB1P43366 347 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 GPR6P46095 362 aaPredicted RBP13.28□□□□□ -0.28
FOXR1-201ENST00000317011 SELENOVP59797 346 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 ERVS71-1P61550 626 aa13.28□□□□□ -0.28
FOXR1-201ENST00000317011 LMO4P61968 165 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms