RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 SELENOFO60613 162 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 PDGFBP01127 241 aaPredicted RBP12.64□□□□□ -0.39
CDH1-201ENST00000261769 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
CDH1-201ENST00000261769 ACBD4Q8NC06 268 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 OR56B2PQ8NGI1 322 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 SLC5A6Q9Y289 635 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
CDH1-201ENST00000261769 A0A087WUJ7 227 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 SLC2A1P11166 492 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 ERP29P30040 261 aaKnown RBP12.63□□□□□ -0.39
CDH1-201ENST00000261769 CA5AP35218 305 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 F2RL1P55085 397 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 RAC1P63000 192 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 S100A7AQ86SG5 101 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 SPNS2Q8IVW8 549 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 LIN7BQ9HAP6 207 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
CDH1-201ENST00000261769 IGHV3-15A0A0B4J1V0 119 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 PAHP00439 452 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 GALNSP34059 522 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDH1-201ENST00000261769 PTOV1Q86YD1 416 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 ENTHD1Q8IYW4 607 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 FAM26EQ8N5C1 309 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 ZNF224Q9NZL3 707 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 GVINP1Q7Z2Y8 2422 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 F5H0A9 414 aaPredicted RBP12.63□□□□□ -0.39
CDH1-201ENST00000261769 MRPL19P49406 292 aaKnown RBP12.63□□□□□ -0.39
CDH1-201ENST00000261769 RBP2P50120 134 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
CDH1-201ENST00000261769 CEACAM16Q2WEN9 425 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 UBE2UQ5VVX9 321 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 HACD4Q5VWC8 232 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 LIPNQ5VXI9 398 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 NLRC3Q7RTR2 1065 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 CENPSQ8N2Z9 138 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 OR51A2Q8NGJ7 313 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 EMG1Q92979 244 aaKnown RBP12.63□□□□□ -0.39
CDH1-201ENST00000261769 PIGTQ969N2 578 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 HSPB2A8KAH6 182 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 GREM1O60565 184 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 NDUFB7P17568 137 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 S100A7P31151 101 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 HSPB2Q16082 182 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 SLC23A3Q6PIS1 610 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 OR4C3Q8NH37 302 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 ST7LQ8TDW4 575 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 HES7Q9BYE0 225 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 SLCO5A1Q9H2Y9 848 aa12.63□□□□□ -0.39
CDH1-201ENST00000261769 UBL3O95164 117 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 GSTP1P09211 210 aaKnown RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 PRR35P0CG20 571 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 VEGFCP49767 419 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 RGS19P49795 217 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 ZNF92Q03936 586 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 EBPQ15125 230 aaKnown RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 PAN3Q58A45 887 aaKnown RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 OR5AS1Q8N127 324 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 OR52I1Q8NGK6 324 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 SLC35B4Q969S0 331 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 ZNF764Q96H86 408 aaPredicted RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 NKX3-1Q99801 234 aaPredicted RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 OPA3Q9H6K4 179 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 EHFQ9NZC4 300 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 ARRDC5A6NEK1 342 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 SEC14L2O76054 403 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 GUSBP08236 651 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 LTC4SQ16873 150 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 LPCAT3Q6P1A2 487 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 DOCK5Q9H7D0 1870 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 MT-CO2P00403 227 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 LIPCP11150 499 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 RGS7BPQ6MZT1 257 aaPredicted RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 Q6ZTK2 550 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 LILRB2Q8N423 598 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 KLK4Q9Y5K2 254 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 IMPA2O14732 288 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 LYRM1O43325 122 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 SCG5P05408 212 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 BMP5P22003 454 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 MTNR1BP49286 362 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 METAP1DQ6UB28 335 aaPredicted RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 LSRQ86X29 649 aaPredicted RBP12.62□□□□□ -0.39
CDH1-201ENST00000261769 NRG4Q8WWG1 115 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 KCNJ15Q99712 375 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 FOXB1Q99853 325 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 GLRX2Q9NS18 164 aa12.62□□□□□ -0.39
CDH1-201ENST00000261769 EML2O95834 649 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 EPHA1P21709 976 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 LTBRP36941 435 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 NUBP1P53384 320 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 RAE1P78406 368 aaKnown RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 ZNF117Q03924 483 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 DCAF10Q5QP82 559 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 MEX3BQ6ZN04 569 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms