RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
NDE1-208ENST00000573694 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
NDE1-208ENST00000573694 SUCLG2Q96I99 432 aa11.87□□□□□ -0.51
NDE1-208ENST00000573694 ISCA1Q9BUE6 129 aa11.87□□□□□ -0.51
NDE1-208ENST00000573694 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
NDE1-208ENST00000573694 AK9Q5TCS8 1911 aa11.87□□□□□ -0.51
NDE1-208ENST00000573694 CCDC88AQ3V6T2 1871 aa11.87□□□□□ -0.51
NDE1-208ENST00000573694 UTYO14607 1347 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 SNED1Q8TER0 1413 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
NDE1-208ENST00000573694 MYH3P11055 1940 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 GRM8O00222 908 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 GPTP24298 496 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 EIF6P56537 245 aaKnown RBP11.86□□□□□ -0.51
NDE1-208ENST00000573694 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 POLA2Q14181 598 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 CCDC191Q8NCU4 936 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
NDE1-208ENST00000573694 C9orf78Q9NZ63 289 aaPredicted RBP11.86□□□□□ -0.51
NDE1-208ENST00000573694 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
NDE1-208ENST00000573694 ATP5J2-PTCD1G3V325 749 aa11.85□□□□□ -0.51
NDE1-208ENST00000573694 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
NDE1-208ENST00000573694 GCKRQ14397 625 aa11.85□□□□□ -0.51
NDE1-208ENST00000573694 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
NDE1-208ENST00000573694 OTUD7AQ8TE49 926 aaPredicted RBP11.85□□□□□ -0.51
NDE1-208ENST00000573694 SSH3Q8TE77 659 aa11.85□□□□□ -0.51
NDE1-208ENST00000573694 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
NDE1-208ENST00000573694 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
NDE1-208ENST00000573694 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
NDE1-208ENST00000573694 HACL1Q9UJ83 578 aa11.85□□□□□ -0.51
NDE1-208ENST00000573694 ABCC12Q96J65 1359 aa11.84□□□□□ -0.51
NDE1-208ENST00000573694 GRAPQ13588 217 aa11.84□□□□□ -0.51
NDE1-208ENST00000573694 ZBTB38Q8NAP3 1195 aaPredicted RBP11.84□□□□□ -0.51
NDE1-208ENST00000573694 GRAPLQ8TC17 118 aaPredicted RBP11.84□□□□□ -0.51
NDE1-208ENST00000573694 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
NDE1-208ENST00000573694 BICC1Q9H694 974 aaKnown RBP11.84□□□□□ -0.51
NDE1-208ENST00000573694 LAMB2P55268 1798 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 SRGAP3O43295 1099 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 DDNO94850 711 aaPredicted RBP11.83□□□□□ -0.52
NDE1-208ENST00000573694 MMP14P50281 582 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 TNIP1Q15025 636 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.52
NDE1-208ENST00000573694 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 ZNF277Q9NRM2 450 aaPredicted RBP11.83□□□□□ -0.52
NDE1-208ENST00000573694 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
NDE1-208ENST00000573694 TIAM2Q8IVF5 1701 aa11.83□□□□□ -0.52
NDE1-208ENST00000573694 LMOD1P29536 600 aaPredicted RBP11.82□□□□□ -0.52
NDE1-208ENST00000573694 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
NDE1-208ENST00000573694 MTX1Q13505 466 aa11.82□□□□□ -0.52
NDE1-208ENST00000573694 EPHA10Q5JZY3 1008 aa11.82□□□□□ -0.52
NDE1-208ENST00000573694 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
NDE1-208ENST00000573694 NIM1KQ8IY84 436 aa11.82□□□□□ -0.52
NDE1-208ENST00000573694 MPNDQ8N594 471 aa11.82□□□□□ -0.52
NDE1-208ENST00000573694 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
NDE1-208ENST00000573694 ZNRF3Q9ULT6 936 aa11.82□□□□□ -0.52
NDE1-208ENST00000573694 SEC24BO95487 1268 aa11.81□□□□□ -0.52
NDE1-208ENST00000573694 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
NDE1-208ENST00000573694 EPHX2P34913 555 aa11.81□□□□□ -0.52
NDE1-208ENST00000573694 CASP7P55210 303 aa11.81□□□□□ -0.52
NDE1-208ENST00000573694 DPP8Q6V1X1 898 aaPredicted RBP11.81□□□□□ -0.52
NDE1-208ENST00000573694 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
NDE1-208ENST00000573694 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
NDE1-208ENST00000573694 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
NDE1-208ENST00000573694 GSPT1P15170 499 aaKnown RBP11.8□□□□□ -0.52
NDE1-208ENST00000573694 DPF2Q92785 391 aa11.8□□□□□ -0.52
NDE1-208ENST00000573694 EYA3Q99504 573 aa11.8□□□□□ -0.52
NDE1-208ENST00000573694 LRRCC1Q9C099 1032 aa11.8□□□□□ -0.52
NDE1-208ENST00000573694 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
NDE1-208ENST00000573694 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
NDE1-208ENST00000573694 SPEF2Q9C093 1822 aa11.8□□□□□ -0.52
NDE1-208ENST00000573694 PASKQ96RG2 1323 aa11.8□□□□□ -0.52
NDE1-208ENST00000573694 SALL3Q9BXA9 1300 aa11.8□□□□□ -0.52
NDE1-208ENST00000573694 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
NDE1-208ENST00000573694 PDE8AO60658 829 aa11.79□□□□□ -0.52
NDE1-208ENST00000573694 SURF6O75683 361 aaKnown RBP11.79□□□□□ -0.52
NDE1-208ENST00000573694 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
NDE1-208ENST00000573694 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
NDE1-208ENST00000573694 CCDC152Q4G0S7 254 aa11.79□□□□□ -0.52
NDE1-208ENST00000573694 BMP2KLQ5H9B9 411 aa11.79□□□□□ -0.52
NDE1-208ENST00000573694 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
NDE1-208ENST00000573694 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
NDE1-208ENST00000573694 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
NDE1-208ENST00000573694 TMEM88BA6NKF7 163 aa11.78□□□□□ -0.52
NDE1-208ENST00000573694 H7C1W4 665 aa11.78□□□□□ -0.52
NDE1-208ENST00000573694 IRS4O14654 1257 aaPredicted RBP11.78□□□□□ -0.52
NDE1-208ENST00000573694 ITGBL1O95965 494 aaPredicted RBP11.78□□□□□ -0.52
NDE1-208ENST00000573694 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
NDE1-208ENST00000573694 TSHZ3Q63HK5 1081 aa11.78□□□□□ -0.52
NDE1-208ENST00000573694 RHPN1Q8TCX5 695 aa11.78□□□□□ -0.52
NDE1-208ENST00000573694 IL1RAPL2Q9NP60 686 aa11.78□□□□□ -0.52
NDE1-208ENST00000573694 ADARB2Q9NS39 739 aaKnown RBP11.78□□□□□ -0.52
NDE1-208ENST00000573694 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
NDE1-208ENST00000573694 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
NDE1-208ENST00000573694 FOXO4P98177 505 aa11.77□□□□□ -0.53
NDE1-208ENST00000573694 RABL6Q3YEC7 729 aaPredicted RBP11.77□□□□□ -0.53
NDE1-208ENST00000573694 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms