RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 PASKQ96RG2 1323 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 PI4KAP2A4QPH2 592 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 HSPA1AP0DMV8 641 aaKnown RBP10.59□□□□□ -0.71
GINS3-204ENST00000561952 HSPA1BP0DMV9 641 aaKnown RBP10.59□□□□□ -0.71
GINS3-204ENST00000561952 KIAA2012Q0VF49 1180 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 DOK7Q18PE1 504 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 CCDC27Q2M243 656 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 CWF19L2Q2TBE0 894 aaKnown RBP10.59□□□□□ -0.71
GINS3-204ENST00000561952 CIAPIN1Q6FI81 312 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 PI4KAP1Q8N8J0 262 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 JMYQ8N9B5 988 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 CCDC191Q8NCU4 936 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 TRPM7Q96QT4 1865 aa10.59□□□□□ -0.71
GINS3-204ENST00000561952 SHTN1A0MZ66 631 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 TMEM88BA6NKF7 163 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 YDJCA8MPS7 323 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 ITGBL1O95965 494 aaPredicted RBP10.58□□□□□ -0.72
GINS3-204ENST00000561952 PCCAP05165 728 aaPredicted RBP10.58□□□□□ -0.72
GINS3-204ENST00000561952 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 TRIM28Q13263 835 aaKnown RBP10.58□□□□□ -0.72
GINS3-204ENST00000561952 WASHC4Q2M389 1173 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 CCDC152Q4G0S7 254 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 KSR2Q6VAB6 950 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 TMC4Q7Z404 712 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 POLLQ9UGP5 575 aa10.58□□□□□ -0.72
GINS3-204ENST00000561952 CACNA1FO60840 1977 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 SCN9AQ15858 1988 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 CNTNAP1P78357 1384 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 TRAF5O00463 557 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 PDE8AO60658 829 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 UFL1O94874 794 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 IGKV5-2P06315 115 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 RPS8P62241 208 aaKnown RBP10.57□□□□□ -0.72
GINS3-204ENST00000561952 EXOSC9Q06265 439 aaKnown RBP10.57□□□□□ -0.72
GINS3-204ENST00000561952 GRM1Q13255 1194 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 FKBP5Q13451 457 aaPredicted RBP10.57□□□□□ -0.72
GINS3-204ENST00000561952 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 PAXIP1Q6ZW49 1069 aaPredicted RBP10.57□□□□□ -0.72
GINS3-204ENST00000561952 CHMP4AQ9BY43 222 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 VPS33BQ9H267 617 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 GPRC5DQ9NZD1 345 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 ANKIB1Q9P2G1 1089 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 ABT1Q9ULW3 272 aaKnown RBP10.57□□□□□ -0.72
GINS3-204ENST00000561952 IL16Q14005 1332 aa10.57□□□□□ -0.72
GINS3-204ENST00000561952 G3V3G9 751 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 PSMD14O00487 310 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 ECE2O60344 883 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
GINS3-204ENST00000561952 CTSWP56202 376 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 FLIIQ13045 1269 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 TNIP1Q15025 636 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 DCAF8Q5TAQ9 597 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 COL13A1Q5TAT6 717 aaPredicted RBP10.56□□□□□ -0.72
GINS3-204ENST00000561952 USP50Q70EL3 339 aaPredicted RBP10.56□□□□□ -0.72
GINS3-204ENST00000561952 UBE3BQ7Z3V4 1068 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 TBC1D16Q8TBP0 767 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 TRPM4Q8TD43 1214 aa10.56□□□□□ -0.72
GINS3-204ENST00000561952 ADARB2Q9NS39 739 aaKnown RBP10.56□□□□□ -0.72
GINS3-204ENST00000561952 NEURL1BA8MQ27 555 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 VEGFBP49765 207 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 ANKRD18AQ8IVF6 992 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 EYA3Q99504 573 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 GLIS2Q9BZE0 524 aaPredicted RBP10.55□□□□□ -0.72
GINS3-204ENST00000561952 GREM2Q9H772 168 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 KCNQ5Q9NR82 932 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 GGA1Q9UJY5 639 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 POLR2AP24928 1970 aaKnown RBP10.55□□□□□ -0.72
GINS3-204ENST00000561952 CDHR2Q9BYE9 1310 aa10.55□□□□□ -0.72
GINS3-204ENST00000561952 F6X3S4 739 aa10.54□□□□□ -0.72
GINS3-204ENST00000561952 TBC1D10BQ4KMP7 808 aaPredicted RBP10.54□□□□□ -0.72
GINS3-204ENST00000561952 RBM26Q5T8P6 1007 aaKnown RBP10.54□□□□□ -0.72
GINS3-204ENST00000561952 SAMD7Q7Z3H4 446 aa10.54□□□□□ -0.72
GINS3-204ENST00000561952 WDR63Q8IWG1 891 aa10.54□□□□□ -0.72
GINS3-204ENST00000561952 ZC3H12CQ9C0D7 883 aaKnown RBP10.54□□□□□ -0.72
GINS3-204ENST00000561952 CNOT7Q9UIV1 285 aaKnown RBP10.54□□□□□ -0.72
GINS3-204ENST00000561952 RTL9Q8NET4 1388 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 H7C1D1 291 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 VAMP4O75379 141 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 TTLL11Q8NHH1 800 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 DNAAF4Q8WXU2 420 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 CDC5LQ99459 802 aaKnown RBP10.53□□□□□ -0.72
GINS3-204ENST00000561952 CHMP3Q9Y3E7 222 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 PSME4Q14997 1843 aa10.53□□□□□ -0.72
GINS3-204ENST00000561952 WTIPA6NIX2 430 aaPredicted RBP10.52□□□□□ -0.73
GINS3-204ENST00000561952 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
GINS3-204ENST00000561952 CELF2O95319 508 aaKnown RBP10.52□□□□□ -0.73
GINS3-204ENST00000561952 EGFRP00533 1210 aa10.52□□□□□ -0.73
GINS3-204ENST00000561952 HIRAP54198 1017 aaPredicted RBP10.52□□□□□ -0.73
GINS3-204ENST00000561952 GCKRQ14397 625 aa10.52□□□□□ -0.73
GINS3-204ENST00000561952 DEFB115Q30KQ5 88 aa10.52□□□□□ -0.73
GINS3-204ENST00000561952 DLK2Q6UY11 383 aa10.52□□□□□ -0.73
GINS3-204ENST00000561952 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
GINS3-204ENST00000561952 XDHP47989 1333 aa10.52□□□□□ -0.73
GINS3-204ENST00000561952 RASSF10A6NK89 507 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 FOXN1O15353 648 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 CYP4F22Q6NT55 531 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms