RNA–Protein interactions for RNA: ENST00000561831.7

TCF4-210, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-210ENST00000561831 SHANK3Q9BYB0 1731 aa12.55□□□□□ -0.4
TCF4-210ENST00000561831 DTNBO60941 627 aa12.55□□□□□ -0.4
TCF4-210ENST00000561831 KRT85P78386 507 aa12.55□□□□□ -0.4
TCF4-210ENST00000561831 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
TCF4-210ENST00000561831 CCDC129Q6ZRS4 1044 aa12.55□□□□□ -0.4
TCF4-210ENST00000561831 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
TCF4-210ENST00000561831 TTC6Q86TZ1 520 aa12.55□□□□□ -0.4
TCF4-210ENST00000561831 DSCC1Q9BVC3 393 aa12.55□□□□□ -0.4
TCF4-210ENST00000561831 TERF1P54274 439 aa12.54□□□□□ -0.4
TCF4-210ENST00000561831 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
TCF4-210ENST00000561831 ZMYM1Q5SVZ6 1142 aa12.54□□□□□ -0.4
TCF4-210ENST00000561831 PAG1Q9NWQ8 432 aa12.54□□□□□ -0.4
TCF4-210ENST00000561831 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
TCF4-210ENST00000561831 AGXT2Q9BYV1 514 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 TCHHQ07283 1943 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 TPM2P07951 284 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
TCF4-210ENST00000561831 TIMM10P62072 90 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 LRRC24Q50LG9 513 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 Q6ZUG5 572 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 STOX1Q6ZVD7 989 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 SMARCC2Q8TAQ2 1214 aa12.53□□□□□ -0.4
TCF4-210ENST00000561831 SPEF2Q9C093 1822 aa12.52□□□□□ -0.4
TCF4-210ENST00000561831 ABCA3Q99758 1704 aa12.52□□□□□ -0.4
TCF4-210ENST00000561831 HCLS1P14317 486 aaPredicted RBP12.52□□□□□ -0.41
TCF4-210ENST00000561831 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.41
TCF4-210ENST00000561831 TCIRG1Q13488 830 aa12.52□□□□□ -0.41
TCF4-210ENST00000561831 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.41
TCF4-210ENST00000561831 LLPHQ9BRT6 129 aaKnown RBP12.52□□□□□ -0.41
TCF4-210ENST00000561831 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.41
TCF4-210ENST00000561831 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.41
TCF4-210ENST00000561831 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
TCF4-210ENST00000561831 A0A1B0GUL7 405 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 GOLIM4O00461 696 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 PFKFB2O60825 505 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 RESTQ13127 1097 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 DHX32Q7L7V1 743 aaKnown RBP12.51□□□□□ -0.41
TCF4-210ENST00000561831 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 NEUROD6Q96NK8 337 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 SLAIN2Q9P270 581 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 CHMP3Q9Y3E7 222 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 TOGARAM1Q9Y4F4 1720 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 RNF113AO15541 343 aaKnown RBP12.51□□□□□ -0.41
TCF4-210ENST00000561831 JAK2O60674 1132 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 STK3Q13188 491 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
TCF4-210ENST00000561831 KDM4AO75164 1064 aa12.5□□□□□ -0.41
TCF4-210ENST00000561831 CSF1RP07333 972 aa12.5□□□□□ -0.41
TCF4-210ENST00000561831 IFIT1P09914 478 aaKnown RBP12.5□□□□□ -0.41
TCF4-210ENST00000561831 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
TCF4-210ENST00000561831 SCRN1Q12765 414 aa12.5□□□□□ -0.41
TCF4-210ENST00000561831 FAM173BQ6P4H8 233 aa12.5□□□□□ -0.41
TCF4-210ENST00000561831 RBM43Q6ZSC3 357 aaKnown RBP12.5□□□□□ -0.41
TCF4-210ENST00000561831 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
TCF4-210ENST00000561831 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
TCF4-210ENST00000561831 PUS3Q9BZE2 481 aaKnown RBP12.5□□□□□ -0.41
TCF4-210ENST00000561831 USP25Q9UHP3 1055 aa12.5□□□□□ -0.41
TCF4-210ENST00000561831 MAST3O60307 1309 aa12.5□□□□□ -0.41
TCF4-210ENST00000561831 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
TCF4-210ENST00000561831 LEO1Q8WVC0 666 aaPredicted RBP12.49□□□□□ -0.41
TCF4-210ENST00000561831 BRF1Q92994 677 aa12.49□□□□□ -0.41
TCF4-210ENST00000561831 ABCC12Q96J65 1359 aa12.49□□□□□ -0.41
TCF4-210ENST00000561831 LIG1P18858 919 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 SLFNL1Q499Z3 407 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
TCF4-210ENST00000561831 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
TCF4-210ENST00000561831 CEP126Q9P2H0 1117 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
TCF4-210ENST00000561831 E7EWF7 191 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 ADCY5O95622 1261 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 CCDC192P0DO97 292 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 EVCP57679 992 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 HSP90AA2PQ14568 343 aaPredicted RBP12.48□□□□□ -0.41
TCF4-210ENST00000561831 NAA16Q6N069 864 aaPredicted RBP12.48□□□□□ -0.41
TCF4-210ENST00000561831 ZBTB38Q8NAP3 1195 aaPredicted RBP12.48□□□□□ -0.41
TCF4-210ENST00000561831 SPATA32Q96LK8 384 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 TMOD3Q9NYL9 352 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 SALL1Q9NSC2 1324 aa12.48□□□□□ -0.41
TCF4-210ENST00000561831 ADD1P35611 737 aaKnown RBP12.47□□□□□ -0.41
TCF4-210ENST00000561831 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
TCF4-210ENST00000561831 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
TCF4-210ENST00000561831 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
TCF4-210ENST00000561831 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
TCF4-210ENST00000561831 DDX19AQ9NUU7 478 aaKnown RBP12.47□□□□□ -0.41
TCF4-210ENST00000561831 M0R2C6 588 aa12.46□□□□□ -0.41
TCF4-210ENST00000561831 FOXP2O15409 715 aa12.46□□□□□ -0.41
TCF4-210ENST00000561831 AP5Z1O43299 807 aa12.46□□□□□ -0.41
TCF4-210ENST00000561831 ZFYP08048 801 aaPredicted RBP12.46□□□□□ -0.41
TCF4-210ENST00000561831 HSP90B1P14625 803 aaKnown RBP12.46□□□□□ -0.41
TCF4-210ENST00000561831 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.41
TCF4-210ENST00000561831 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.41
TCF4-210ENST00000561831 OSBP2Q969R2 916 aa12.46□□□□□ -0.41
TCF4-210ENST00000561831 PGBD1Q96JS3 809 aa12.46□□□□□ -0.41
TCF4-210ENST00000561831 CLSTN2Q9H4D0 955 aa12.46□□□□□ -0.41
TCF4-210ENST00000561831 TFIP11Q9UBB9 837 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms