RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 TRAF5O00463 557 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 APAF1O14727 1248 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 FOXN1O15353 648 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 KIAA2012Q0VF49 1180 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 GRAPQ13588 217 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 SF3B3Q15393 1217 aaKnown RBP8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 CCDC184Q52MB2 194 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 CST9Q5W186 159 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 NIM1KQ8IY84 436 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 GRAPLQ8TC17 118 aaPredicted RBP8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 CELF1Q92879 486 aaKnown RBP8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 VPS33BQ9H267 617 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 PHAXQ9H814 394 aaKnown RBP8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 GPRC5DQ9NZD1 345 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 DBF4Q9UBU7 674 aaPredicted RBP8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
HMGN1P16-201ENST00000508308 SHTN1A0MZ66 631 aa8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 GMPSP49915 693 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 HIRAP54198 1017 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 TRIM28Q13263 835 aaKnown RBP8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 DPP8Q6V1X1 898 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 USP50Q70EL3 339 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 DDX46Q7L014 1031 aaKnown RBP8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 TNS4Q8IZW8 715 aa8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 MPNDQ8N594 471 aa8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 C8orf58Q8NAV2 365 aa8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 HYPKQ9NX55 129 aa8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 WBP1LQ9NX94 342 aa8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 TRPM7Q96QT4 1865 aa8.38□□□□□ -1.07
HMGN1P16-201ENST00000508308 ELL2O00472 640 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 RAD17O75943 681 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 IRX5P78411 483 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 DEFB115Q30KQ5 88 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 SUPT20HQ8NEM7 779 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 KCNQ5Q9NR82 932 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 POLLQ9UGP5 575 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 PGAP2Q9UHJ9 254 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 SCN9AQ15858 1988 aa8.37□□□□□ -1.07
HMGN1P16-201ENST00000508308 LMOD1P29536 600 aaPredicted RBP8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 GNAI1P63096 354 aa8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 GPSM2P81274 684 aa8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 CIAPIN1Q6FI81 312 aa8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 DLK2Q6UY11 383 aa8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 TSPYL6Q8N831 410 aa8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 GPR101Q96P66 508 aaPredicted RBP8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 ADARB2Q9NS39 739 aaKnown RBP8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 THSD7BQ9C0I4 1608 aa8.36□□□□□ -1.07
HMGN1P16-201ENST00000508308 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 POLR2AP24928 1970 aaKnown RBP8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 WDR33Q9C0J8 1336 aaKnown RBP8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 IRS4O14654 1257 aaPredicted RBP8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 EGFRP00533 1210 aa8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 JARID2Q92833 1246 aaPredicted RBP8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 GLIS2Q9BZE0 524 aaPredicted RBP8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 SEC31BQ9NQW1 1179 aa8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 NSFL1CQ9UNZ2 370 aaKnown RBP8.35□□□□□ -1.07
HMGN1P16-201ENST00000508308 CDHR2Q9BYE9 1310 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 WTIPA6NIX2 430 aaPredicted RBP8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 PSMD14O00487 310 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 RIMBP2O15034 1052 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 RPS8P62241 208 aaKnown RBP8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 CYP4F22Q6NT55 531 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 RIC3Q7Z5B4 369 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 ZBTB38Q8NAP3 1195 aaPredicted RBP8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 TBC1D16Q8TBP0 767 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 TSR2Q969E8 191 aaKnown RBP8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 MYD88Q99836 296 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 TMX4Q9H1E5 349 aaPredicted RBP8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 DBNDD1Q9H9R9 158 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 CNOT7Q9UIV1 285 aaKnown RBP8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 ABT1Q9ULW3 272 aaKnown RBP8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 TLL2Q9Y6L7 1015 aa8.34□□□□□ -1.07
HMGN1P16-201ENST00000508308 PCCAP05165 728 aaPredicted RBP8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 IGKV5-2P06315 115 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 HSPA8P11142 646 aaKnown RBP8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 CTCFP49711 727 aaPredicted RBP8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 LBX1P52954 281 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 TNIP1Q15025 636 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 DOK7Q18PE1 504 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 G2E3Q7L622 706 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 SAPCD2Q86UD0 394 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 MICALL2Q8IY33 904 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 CAPNS2Q96L46 248 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 PODXL2Q9NZ53 605 aa8.33□□□□□ -1.08
HMGN1P16-201ENST00000508308 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 ECE2O60344 883 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 AOC2O75106 756 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 CELF2O95319 508 aaKnown RBP8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 GOLGA2Q08379 1002 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 WWC1Q8IX03 1113 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms