RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 TMED8Q6PL24 325 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-210ENST00000463446 SMIM5Q71RC9 77 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 LPIN2Q92539 896 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 JARID2Q92833 1246 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-210ENST00000463446 ZNF622Q969S3 477 aaKnown RBP eCLIP9.08□□□□□ -0.96
EPHA4-210ENST00000463446 EYA3Q99504 573 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 ANKIB1Q9P2G1 1089 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 RIPOR2Q9Y4F9 1068 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-210ENST00000463446 SLC5A1P13866 664 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 RFX5P48382 616 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-210ENST00000463446 PUM3Q15397 648 aaKnown RBP9.07□□□□□ -0.96
EPHA4-210ENST00000463446 FAM161AQ3B820 660 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 MSL1Q68DK7 614 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 POTEHQ6S545 545 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 CASC1Q6TDU7 716 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 VPS37DQ86XT2 251 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 SYNE4Q8N205 404 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 EXOC6BQ9Y2D4 811 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 ANKRD36CQ5JPF3 1778 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 BCORQ6W2J9 1755 aa9.07□□□□□ -0.96
EPHA4-210ENST00000463446 TTC41PQ6P2S7 1318 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 KDM2BQ8NHM5 1336 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 AFDNP55196 1824 aaKnown RBP9.06□□□□□ -0.96
EPHA4-210ENST00000463446 G3V3G9 751 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 ZBTB22O15209 634 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 UQCRFS1P1P0C7P4 283 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 DCAF8Q5TAQ9 597 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 NEUROD6Q96NK8 337 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 SIL1Q9H173 461 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 MINPP1Q9UNW1 487 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 SCN7AQ01118 1682 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 EP400Q96L91 3159 aa9.06□□□□□ -0.96
EPHA4-210ENST00000463446 XDHP47989 1333 aa9.05□□□□□ -0.96
EPHA4-210ENST00000463446 AOX1Q06278 1338 aa9.05□□□□□ -0.96
EPHA4-210ENST00000463446 PPEF1O14829 653 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-210ENST00000463446 SEMA3EO15041 775 aa9.05□□□□□ -0.96
EPHA4-210ENST00000463446 GLRX3O76003 335 aaKnown RBP9.05□□□□□ -0.96
EPHA4-210ENST00000463446 MMP14P50281 582 aa9.05□□□□□ -0.96
EPHA4-210ENST00000463446 TTF1Q15361 905 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-210ENST00000463446 DALRD3Q5D0E6 543 aaKnown RBP9.05□□□□□ -0.96
EPHA4-210ENST00000463446 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.05□□□□□ -0.96
EPHA4-210ENST00000463446 ZNF512BQ96KM6 892 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-210ENST00000463446 ZC3H12CQ9C0D7 883 aaKnown RBP9.05□□□□□ -0.96
EPHA4-210ENST00000463446 OSBPL3Q9H4L5 887 aa9.05□□□□□ -0.96
EPHA4-210ENST00000463446 GGA1Q9UJY5 639 aa9.05□□□□□ -0.96
EPHA4-210ENST00000463446 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-210ENST00000463446 HIP1O00291 1037 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 CHRNDQ07001 517 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 TFCP2Q12800 502 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 ATP2B3Q16720 1220 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
EPHA4-210ENST00000463446 ATG9AQ7Z3C6 839 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 AACSQ86V21 672 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 MPNDQ8N594 471 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 ZGPATQ8N5A5 531 aaKnown RBP9.04□□□□□ -0.96
EPHA4-210ENST00000463446 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-210ENST00000463446 ECHDC1Q9NTX5 307 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 STAP2Q9UGK3 403 aa9.04□□□□□ -0.96
EPHA4-210ENST00000463446 NSFL1CQ9UNZ2 370 aaKnown RBP9.04□□□□□ -0.96
EPHA4-210ENST00000463446 C4AP0C0L4 1744 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 APBB1O00213 710 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 FRAT2O75474 233 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-210ENST00000463446 SASH1O94885 1247 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 MX1P20591 662 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 TNNI3KQ59H18 835 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 ZSCAN25Q6NSZ9 544 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 DPP8Q6V1X1 898 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-210ENST00000463446 ZNF804AQ7Z570 1209 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 ZNF594Q96JF6 807 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-210ENST00000463446 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 LNPKQ9C0E8 428 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 SEC31BQ9NQW1 1179 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 PA2G4Q9UQ80 394 aaKnown RBP9.03□□□□□ -0.96
EPHA4-210ENST00000463446 FPGT-TNNI3KV9GXZ4 949 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 ZNF804BA4D1E1 1349 aa9.03□□□□□ -0.96
EPHA4-210ENST00000463446 ABCC12Q96J65 1359 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 A0A1B0GUL7 405 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 C6orf229H3BNL8 230 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 ATP5JP18859 108 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 HIBADHP31937 336 aaKnown RBP9.02□□□□□ -0.97
EPHA4-210ENST00000463446 PTGER2P43116 358 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 TIMM10P62072 90 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 LRRC24Q50LG9 513 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 CCDC93Q567U6 631 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 TTC39AQ5SRH9 613 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 SPTY2D1Q68D10 685 aaPredicted RBP9.02□□□□□ -0.97
EPHA4-210ENST00000463446 PRPF40BQ6NWY9 871 aaKnown RBP9.02□□□□□ -0.97
EPHA4-210ENST00000463446 CNTROBQ8N137 903 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 CELF1Q92879 486 aaKnown RBP9.02□□□□□ -0.97
EPHA4-210ENST00000463446 DENND2AQ9ULE3 1009 aa9.02□□□□□ -0.97
EPHA4-210ENST00000463446 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 GRIN3BO60391 1043 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 PDE1AP54750 535 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 COL24A1Q17RW2 1714 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 WASHC4Q2M389 1173 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms