RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 DACT1Q9NYF0 836 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 ABCA6Q8N139 1617 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 DHX32Q7L7V1 743 aaKnown RBP7.34□□□□□ -1.23
PRKDC-202ENST00000338368 ZNF287Q9HBT7 754 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 CROCC2H7BZ55 1655 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 AK7Q96M32 723 aa7.34□□□□□ -1.24
PRKDC-202ENST00000338368 COPRSQ9NQ92 184 aa7.34□□□□□ -1.24
PRKDC-202ENST00000338368 LDHCP07864 332 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 PIBF1Q8WXW3 757 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 PTPDC1A2A3K4 754 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 DTNBO60941 627 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 ATP2B2Q01814 1243 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 FAM173BQ6P4H8 233 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 USP5P45974 858 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 DACH1Q9UI36 760 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 SLC4A4Q9Y6R1 1079 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 CDC42BPBQ9Y5S2 1711 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 NBPF5PQ86XG9 351 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-202ENST00000338368 ZSCAN29Q8IWY8 852 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-202ENST00000338368 ADAMTS13Q76LX8 1427 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 WDR17Q8IZU2 1322 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 RPS6KB1P23443 525 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 TM6SF1Q9BZW5 370 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 TMTC2Q8N394 836 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 CCDC87Q9NVE4 849 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 SPATA31A3Q5VYP0 1347 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 SH3TC1Q8TE82 1336 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 SMTNL1A8MU46 457 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 HCLS1P14317 486 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-202ENST00000338368 FSIP1Q8NA03 581 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 APPBP2Q92624 585 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 E9PCH4 1651 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 PDE8AO60658 829 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 ZAP70P43403 619 aa7.33□□□□□ -1.24
PRKDC-202ENST00000338368 CCAR2Q8N163 923 aaKnown RBP7.32□□□□□ -1.24
PRKDC-202ENST00000338368 LMTK3Q96Q04 1460 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 ZNF444Q8N0Y2 327 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-202ENST00000338368 CTDP1Q9Y5B0 961 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-202ENST00000338368 NEXMIFQ5QGS0 1516 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 ZBTB43O43298 467 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 LPIN2Q92539 896 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 BRD1O95696 1058 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 PTH1RQ03431 593 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 AGLP35573 1532 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 ZNF165P49910 485 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 ALG1Q9BT22 464 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 CYP27B1O15528 508 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 SASH1O94885 1247 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 RBM5P52756 815 aaKnown RBP eCLIP7.32□□□□□ -1.24
PRKDC-202ENST00000338368 BRINP3Q76B58 766 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 MIGA1Q8NAN2 632 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 RPGRQ92834 1020 aaKnown RBP7.32□□□□□ -1.24
PRKDC-202ENST00000338368 UVSSAQ2YD98 709 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 LRRC24Q50LG9 513 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 ASAP1Q9ULH1 1129 aa7.32□□□□□ -1.24
PRKDC-202ENST00000338368 CNNM2Q9H8M5 875 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 CD2BP2O95400 341 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 SLC26A6Q9BXS9 759 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 CEP131Q9UPN4 1083 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 TSPY2A6NKD2 308 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 C6orf229H3BNL8 230 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 CCAR1Q8IX12 1150 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 SEC62Q99442 399 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 CRNKL1Q9BZJ0 848 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 CTAGE5O15320 804 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 WTAPQ15007 396 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 CDK5RAP3Q96JB5 506 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 PCCAP05165 728 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 RASEFQ8IZ41 740 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 KRT23Q9C075 422 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 RTCBQ9Y3I0 505 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 ADGRB1O14514 1584 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 PTPN12Q05209 780 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 NYXQ9GZU5 481 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 ADCY5O95622 1261 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 TLR7Q9NYK1 1049 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 ZNF335Q9H4Z2 1342 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 TAF5LO75529 589 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 PDE4BQ07343 736 aa7.31□□□□□ -1.24
PRKDC-202ENST00000338368 DHX8Q14562 1220 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 DBNLQ9UJU6 430 aaKnown RBP7.31□□□□□ -1.24
PRKDC-202ENST00000338368 OVOS2A0A0J9YW53 1432 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 OVOS2Q6IE36 1432 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 A0A0D9SFI3 127 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 CATIPQ7Z7H3 387 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 CNNM3Q8NE01 707 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 ESR2Q92731 530 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 LMBRD1Q9NUN5 540 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 IGKV5-2P06315 115 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 ZBTB38Q8NAP3 1195 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-202ENST00000338368 NSFL1CQ9UNZ2 370 aaKnown RBP7.3□□□□□ -1.24
PRKDC-202ENST00000338368 PPRC1Q5VV67 1664 aaKnown RBP7.3□□□□□ -1.24
PRKDC-202ENST00000338368 NLRP5P59047 1200 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 GIGYF2Q6Y7W6 1299 aaKnown RBP7.3□□□□□ -1.24
PRKDC-202ENST00000338368 ADGRL3Q9HAR2 1447 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 VWDEQ8N2E2 1590 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 LSG1Q9H089 658 aaKnown RBP7.3□□□□□ -1.24
PRKDC-202ENST00000338368 MTX1Q13505 466 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 NAA16Q6N069 864 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms