RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 A0A075B6Q4 140 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 H0YC42 278 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 KIAA0513O60268 411 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OR10H3O60404 316 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 UGT2B17O75795 530 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 SNX4O95219 450 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ABCD3P28288 659 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 NTSP30990 170 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 RAD52P43351 418 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 NCBP2P52298 156 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CDK5Q00535 292 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 COX10Q12887 443 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 DAZAP2Q15038 168 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 NTRK2Q16620 822 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 HYAL4Q2M3T9 481 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 SLC48A1Q6P1K1 146 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 C1orf94Q6P1W5 598 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 VWA1Q6PCB0 445 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 KRT73Q86Y46 540 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF441Q8N8Z8 693 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OR5M1Q8NGP8 315 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 MOAP1Q96BY2 351 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM80Q96HE8 168 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 IL4I1Q96RQ9 567 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 SDHCQ99643 169 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 GPA33Q99795 319 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ARHGDIGQ99819 225 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PINK1Q9BXM7 581 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 POLR2J3Q9H1A7 115 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OPN3Q9H1Y3 402 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 SIAEQ9HAT2 523 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 INIPQ9NRY2 104 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ZCCHC3Q9NUD5 404 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 NDUFB11Q9NX14 153 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 DNAJC27Q9NZQ0 273 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TESQ9UGI8 421 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 DKKL1Q9UK85 242 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CLEC4AQ9UMR7 237 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CFL2Q9Y281 166 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PEX16Q9Y5Y5 336 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ARHGAP21Q5T5U3 1957 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 A0A087X0M5 115 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 LOC100506127A0A0U1RQW1 187 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 A0A1B0GX30 115 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 RNF212BA8MTL3 300 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PRKYO43930 277 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TPST2O60704 377 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PTTG1O95997 202 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OPN1LWP04000 364 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 RNASE1P07998 156 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CRYBB2P43320 205 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PCYT1AP49585 367 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CD300CQ08708 224 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 MLLT11Q13015 90 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CBX3Q13185 183 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 FNDC7Q5VTL7 733 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 FAM205BPQ63HN1 556 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 GDPGP1Q6ZNW5 385 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ZER1Q7Z7L7 766 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PARP16Q8N5Y8 322 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 NANOGP1Q8N7R0 232 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OR56A1Q8NGH5 318 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OR6T1Q8NGN1 323 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 MBD6Q96DN6 1003 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 GIMAP5Q96F15 307 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF681Q96N22 645 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 WFIKKN1Q96NZ8 548 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ADOQ96SZ5 270 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 MND1Q9BWT6 205 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TSSK6Q9BXA6 273 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 C11orf54Q9H0W9 315 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 POLE4Q9NR33 117 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 NTMQ9P121 344 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CLEC2DQ9UHP7 191 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 DIMT1Q9UNQ2 313 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 RPL36Q9Y3U8 105 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CHST2Q9Y4C5 530 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 A0A0G2JPF8 293 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 HNRNPCL2B2RXH8 293 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 HNRNPCL3B7ZW38 293 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SCO2O43819 266 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ICOSLGO75144 302 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 TRIM3O75382 744 aaPredicted RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 TGM6O95932 706 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 HNRNPCL4P0DMR1 293 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 NR2F1P10589 423 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 DPP4P27487 766 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 POU1F1P28069 291 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ANXA11P50995 505 aaKnown RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ATP5J2P56134 94 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 GNA13Q14344 377 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SPHARQ15513 63 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 MED22Q15528 200 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 LTB4RQ15722 352 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SYT14P1Q58G82 188 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 RAET1LQ5VY80 246 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OLIG3Q7RTU3 272 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 IQCF1Q8N6M8 205 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms