RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 HGFACQ04756 655 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 RUNX1T1Q06455 604 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 CARTPTQ16568 116 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 MOGQ16653 247 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 IGFN1Q86VF2 1251 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 CIARTQ8N365 385 aaPredicted RBP12.24□□□□□ -0.45
LIG1-218ENST00000599322 FITM2Q8N6M3 262 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 ZNF540Q8NDQ6 660 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 OR52J3Q8NH60 311 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 NEU4Q8WWR8 484 aaPredicted RBP12.24□□□□□ -0.45
LIG1-218ENST00000599322 HDAC2Q92769 488 aaKnown RBP12.24□□□□□ -0.45
LIG1-218ENST00000599322 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 C7orf34Q96L11 122 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 LRGUKQ96M69 825 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 ZNF570Q96NI8 536 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 SEPHS2Q99611 448 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 CD300AQ9UGN4 299 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 A0A1W2PPL8 197 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 SH3PXD2BA1X283 911 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 ZNF503-AS2A6NEH8 195 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 UNC119BA6NIH7 251 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 C12orf71A8MTZ7 269 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 NDUFS8O00217 210 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 OR10H3O60404 316 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 KRT36O76013 467 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 SLC2A10O95528 541 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 PATE4P0C8F1 98 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 EVX1P49640 407 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 ZNF133P52736 654 aaPredicted RBP12.23□□□□□ -0.45
LIG1-218ENST00000599322 ARL9Q6T311 187 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 MEX3DQ86XN8 651 aaKnown RBP12.23□□□□□ -0.45
LIG1-218ENST00000599322 WDFY1Q8IWB7 410 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 SVOPLQ8N434 492 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 LINC00471Q8N535 108 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 C11orf40Q8WZ69 217 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 RSRC1Q96IZ7 334 aaKnown RBP12.23□□□□□ -0.45
LIG1-218ENST00000599322 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 WACQ9BTA9 647 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 ACTR3BQ9P1U1 418 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 DUSP13Q9UII6 198 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 PLCE1Q9P212 2302 aa12.23□□□□□ -0.45
LIG1-218ENST00000599322 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 SYNGR3O43761 229 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 DIRAS1O95057 198 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 MT-ND5P03915 603 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 LCKP06239 509 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 ZNF35P13682 527 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 CCNOP22674 350 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 RRM2P31350 389 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 GDI2P50395 445 aaKnown RBP12.22□□□□□ -0.45
LIG1-218ENST00000599322 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.45
LIG1-218ENST00000599322 FXNQ16595 210 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 MST1LQ2TV78 715 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 FAM27BQ5VT28 67 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 RGS7BPQ6MZT1 257 aaPredicted RBP12.22□□□□□ -0.45
LIG1-218ENST00000599322 DNM1P34Q6PK57 102 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 SLC25A47Q6Q0C1 308 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 DPY19L2P2Q6ZN68 376 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 MYPOPQ86VE0 399 aaPredicted RBP12.22□□□□□ -0.45
LIG1-218ENST00000599322 DHFR2Q86XF0 187 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 ZDHHC21Q8IVQ6 265 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 C1orf174Q8IYL3 243 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 HTRA1Q92743 480 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 MRPL24Q96A35 216 aaKnown RBP12.22□□□□□ -0.45
LIG1-218ENST00000599322 TSPAN32Q96QS1 320 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 TRIM15Q9C019 465 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 RERGLQ9H628 205 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 IL1RAPQ9NPH3 570 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
LIG1-218ENST00000599322 TIMM10BQ9Y5J6 103 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 ZANQ9Y493 2812 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
LIG1-218ENST00000599322 LOC390937A0A1W2PQ73 354 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 M0R233 179 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 CST2P09228 141 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 MSR1P21757 451 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 NOS3P29474 1203 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 SDHAP31040 664 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 SLC6A6P31641 620 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 CDAP32320 146 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 FMODQ06828 376 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 FAM98BQ52LJ0 330 aaKnown RBP12.21□□□□□ -0.45
LIG1-218ENST00000599322 PABPC1L2AQ5JQF8 200 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 CYP2R1Q6VVX0 501 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 ADCK1Q86TW2 530 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 FAM86B1Q8N7N1 296 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 LRRC75AQ8NAA5 344 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 ICA1LQ8NDH6 482 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 OR10H5Q8NGA6 315 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 ZNF519Q8TB69 540 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 GNPDA2Q8TDQ7 276 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 SNX33Q8WV41 574 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 Q96M85 177 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 DOK1Q99704 481 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 ZNF224Q9NZL3 707 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms