RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 MMP15P51511 669 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 MVDP53602 400 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 BTG1P62324 171 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 MELKQ14680 651 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 PDCD1Q15116 288 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 NRN1LQ496H8 165 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 LRRN1Q6UXK5 716 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 HIST3H2AQ7L7L0 130 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 ZER1Q7Z7L7 766 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 RANBP3LQ86VV4 465 aaPredicted RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 C1QL4Q86Z23 238 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 MUC20Q8N307 709 aaPredicted RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 LRRC18Q8N456 261 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 SLC25A40Q8TBP6 338 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 HIST1H2ACQ93077 130 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 THOC1Q96FV9 657 aaKnown RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 CITED1Q99966 193 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 RBM4BQ9BQ04 359 aaKnown RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 TMEM43Q9BTV4 400 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 A4GALTQ9NPC4 353 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 TMEM106BQ9NUM4 274 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 TRIM33Q9UPN9 1127 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 LRCH1Q9Y2L9 728 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 CLPSL1A2RUU4 121 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 C5orf49A4QMS7 147 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 SRRM5B3KS81 715 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 LRRN3E7EW58 273 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 H3BSA7 217 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 ERLIN1O75477 346 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 NGFP01138 241 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 CD55P08174 381 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 ADH4P08319 380 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 PPIAL4GP0DN37 164 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 ETS2P15036 469 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 MPV17P39210 176 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 ARHGDIAP52565 204 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 SEC61A1P61619 476 aaKnown RBP10.05□□□□□ -0.8
CTNS-208ENST00000574218 FADDQ13158 208 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 OR1Q1Q15612 314 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 FBLN7Q53RD9 439 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 TTMPQ5BVD1 217 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 MBNL2Q5VZF2 373 aaKnown RBP10.05□□□□□ -0.8
CTNS-208ENST00000574218 FIP1L1Q6UN15 594 aaKnown RBP10.05□□□□□ -0.8
CTNS-208ENST00000574218 WDR88Q6ZMY6 472 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 HDDC2Q7Z4H3 204 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 EIF1ADQ8N9N8 165 aaKnown RBP10.05□□□□□ -0.8
CTNS-208ENST00000574218 ABHD4Q8TB40 342 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 KLF14Q8TD94 323 aaPredicted RBP10.05□□□□□ -0.8
CTNS-208ENST00000574218 PLEKHA8Q96JA3 519 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 OR2J1Q9GZK6 312 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 MEAF6Q9HAF1 191 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 SLC6A13Q9NSD5 602 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 KIF17Q9P2E2 1029 aa10.05□□□□□ -0.8
CTNS-208ENST00000574218 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 A0A0B4J2E0 115 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 MDFIC2A0A1B0GVS7 189 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 A0A1B0GX12 115 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 PRORSD1PA6NEY8 169 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 SURF4O15260 269 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 SLC22A3O75751 556 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 NDUFA7O95182 113 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 UMPSP11172 480 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 RPS2P15880 293 aaKnown RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 MDH2P40926 338 aaKnown RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 PPP1CBP62140 327 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 GNB2P62879 340 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 PAX8Q06710 450 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 HLXQ14774 488 aaPredicted RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 TAF11Q15544 211 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 TAF9Q16594 264 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 MTX3Q5HYI7 312 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 SWT1Q5T5J6 900 aaKnown RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 GPR157Q5UAW9 335 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 NXNQ6DKJ4 435 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 LRFN4Q6PJG9 635 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 DHRS4L2Q6PKH6 230 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 ARL9Q6T311 187 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 NHLRC1Q6VVB1 395 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 MSANTD1Q6ZTZ1 278 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 LRRC28Q86X40 367 aaPredicted RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 BHLHE22Q8NFJ8 381 aaPredicted RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 MAL2Q969L2 176 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 UPRTQ96BW1 309 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 MARS2Q96GW9 593 aaKnown RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 SSBP3Q9BWW4 388 aaPredicted RBP10.04□□□□□ -0.8
CTNS-208ENST00000574218 EVA1AQ9H8M9 152 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 MARCH7Q9H992 704 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 ELOVL3Q9HB03 270 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 MSL2Q9HCI7 577 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 NOX4Q9NPH5 578 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 NANSQ9NR45 359 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 LGALS13Q9UHV8 139 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 RNF114Q9Y508 228 aa10.04□□□□□ -0.8
CTNS-208ENST00000574218 F5H0A9 414 aaPredicted RBP10.03□□□□□ -0.8
CTNS-208ENST00000574218 BIRC5O15392 142 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 PLATP00750 562 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 MMP7P09237 267 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms