RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SLC19A3Q9BZV2 496 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 KCNN2Q9H2S1 579 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 RAD21L1Q9H4I0 556 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 PATZ1Q9HBE1 687 aaKnown RBP15.04■□□□□ -0
TSPAN3-208ENST00000560514 BCL2L10Q9HD36 194 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 NPHS2Q9NP85 383 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 SLC6A13Q9NSD5 602 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 CGGBP1Q9UFW8 167 aaPredicted RBP15.04■□□□□ -0
TSPAN3-208ENST00000560514 ZDHHC8Q9ULC8 765 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 IGHV2-70P01814 119 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 BMP2P12643 396 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 HTR2AP28223 471 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 PRKAR1BP31321 381 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 SLC6A9P48067 706 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 MMP15P51511 669 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 ZNF84P51523 738 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 SPATA46Q5T0L3 261 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 THEM4Q5T1C6 240 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 OLFML2AQ68BL7 652 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 BTNL3Q6UXE8 466 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 NHLRC1Q6VVB1 395 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 WDR88Q6ZMY6 472 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 C9orf139Q6ZV77 190 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 OR5J2Q8NH18 312 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 IPCEF1Q8WWN9 437 aaPredicted RBP15.03■□□□□ -0
TSPAN3-208ENST00000560514 GEMIN6Q8WXD5 167 aaKnown RBP15.03■□□□□ -0
TSPAN3-208ENST00000560514 SLC25A44Q96H78 314 aaPredicted RBP15.03■□□□□ -0
TSPAN3-208ENST00000560514 NANOGQ9H9S0 305 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 GMEB1Q9Y692 573 aa15.03■□□□□ -0
TSPAN3-208ENST00000560514 FAM181BA6NEQ2 426 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 HOXA3O43365 443 aaPredicted RBP15.02■□□□□ -0
TSPAN3-208ENST00000560514 MT-ATP6P00846 226 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 QDPRP09417 244 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 IGHV4-38-2P0DP08 117 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 TNFAIP6P98066 277 aaPredicted RBP15.02■□□□□ -0
TSPAN3-208ENST00000560514 FADDQ13158 208 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 RGNQ15493 299 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 TMEM155Q4W5P6 130 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 MAVSQ7Z434 540 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 LRRC18Q8N456 261 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 GTF2H4Q92759 462 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 C7orf26Q96N11 449 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 OR52B2Q96RD2 323 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 CITED1Q99966 193 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 SLC30A2Q9BRI3 323 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 CCNB1IP1Q9NPC3 277 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 TNFRSF19Q9NS68 423 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 TMEM106BQ9NUM4 274 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 IL20RAQ9UHF4 553 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 SLC13A4Q9UKG4 626 aa15.02■□□□□ -0
TSPAN3-208ENST00000560514 ZSCAN5BA6NJL1 495 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 A8MXK9 166 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 LRRN3E7EW58 273 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 CLIC1O00299 241 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 RNF13O43567 381 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 TNFSF4P23510 183 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 STOMP27105 288 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 CLRN1P58418 232 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 SEC61A1P61619 476 aaKnown RBP15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 NRN1LQ496H8 165 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 C6orf10Q5SRN2 563 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 AGBL2Q5U5Z8 902 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 LRFN4Q6PJG9 635 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 LRRN1Q6UXK5 716 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 KRT73Q86Y46 540 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 C1QL4Q86Z23 238 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 C1orf174Q8IYL3 243 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 SLC25A40Q8TBP6 338 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 ZBTB9Q96C00 473 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 TMEM43Q9BTV4 400 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 SPATA5L1Q9BVQ7 753 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 A4GALTQ9NPC4 353 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 USH1CQ9Y6N9 552 aa15.01□□□□□ -0.01
TSPAN3-208ENST00000560514 TRAV40A0A0B4J280 105 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 CLPSL1A2RUU4 121 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 ADH4P08319 380 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 PPIAL4GP0DN37 164 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 ETS2P15036 469 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 MPV17P39210 176 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 RGS8P57771 180 aaPredicted RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 BTG1P62324 171 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 PAX8Q06710 450 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 MELKQ14680 651 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 OR1Q1Q15612 314 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 FBLN7Q53RD9 439 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 PABPC1L2AQ5JQF8 200 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 MBNL2Q5VZF2 373 aaKnown RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 FIP1L1Q6UN15 594 aaKnown RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 KLF14Q8TD94 323 aaPredicted RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 MAL2Q969L2 176 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 VPS33AQ96AX1 596 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 MARS2Q96GW9 593 aaKnown RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 RBM4BQ9BQ04 359 aaKnown RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 CCDC28BQ9BUN5 200 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 OR2J1Q9GZK6 312 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 PAIP1Q9H074 479 aaKnown RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 TRIM33Q9UPN9 1127 aa15□□□□□ -0.01
TSPAN3-208ENST00000560514 SOX21Q9Y651 276 aaPredicted RBP15□□□□□ -0.01
TSPAN3-208ENST00000560514 A0A0B4J2E0 115 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 MDFIC2A0A1B0GVS7 189 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms