RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 MOSPD2Q8NHP6 518 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 C10orf105Q8TEF2 133 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 S100PBPQ96BU1 408 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 ERMAPQ96PL5 475 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 SLC38A2Q96QD8 506 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF184Q99676 751 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 ADI1Q9BV57 179 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 IMPAD1Q9NX62 359 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 IL20Q9NYY1 176 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 EMC3Q9P0I2 261 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 KLHL9Q9P2J3 617 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 GRHPRQ9UBQ7 328 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 REV1Q9UBZ9 1251 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 BAIAP2Q9UQB8 552 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 NOX1Q9Y5S8 564 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 XKRYO14609 159 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 SMAD9O15198 467 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 RAMP1O60894 148 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 SS18L1O75177 396 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 IFNGP01579 166 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 HMGN1P05114 100 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 IGFBP1P08833 259 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 CAPGP40121 348 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 DAP3P51398 398 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 NUDT6P53370 316 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 ERVK-25P63136 954 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 MYBPC1Q00872 1141 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 BSPH1Q075Z2 132 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 ZP4Q12836 540 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 PTGES3Q15185 160 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 RNPS1Q15287 305 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 C11orf71Q6IPW1 123 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 BEND4Q6ZU67 534 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 HDDC2Q7Z4H3 204 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 PXKQ7Z7A4 578 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 JAZF1Q86VZ6 243 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 RFLNBQ8N5W9 214 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 IQCF1Q8N6M8 205 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF525Q8N782 197 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 SGMS2Q8NHU3 365 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 MSI2Q96DH6 328 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 APOL4Q9BPW4 351 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 KATNB1Q9BVA0 655 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 TAS2R5Q9NYW4 299 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 CISD1Q9NZ45 108 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 CLEC4AQ9UMR7 237 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 IER3IP1Q9Y5U9 82 aa10.92□□□□□ -0.66
CLSTN3-208ENST00000538933 LOC100130705A0A1B0GUX0 176 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF726A6NNF4 738 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 SHISA9B4DS77 424 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 MS4A18H0YCH9 400 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 TCF21O43680 179 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 CYTIPO60759 359 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 BCL10O95999 233 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 CD14P08571 375 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 USF1P22415 310 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 POLR2IP36954 125 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 GIPRP48546 466 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 GZMKP49863 264 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 MELKQ14680 651 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 TSC22D1Q15714 1073 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 TAB1Q15750 504 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 SNAPC1Q16533 368 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 MS4A18Q3C1V0 323 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 TMEM201Q5SNT2 666 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 TMEM236Q5W0B7 351 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 GPR139Q6DWJ6 353 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 ABLIM2Q6H8Q1 611 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 FAM166AQ6J272 317 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 THSD4Q6ZMP0 1018 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 SLC35D2Q76EJ3 337 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 GABRG1Q8N1C3 465 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 SETD9Q8NE22 299 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 STEAP2Q8NFT2 490 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 OR8D4Q8NGM9 314 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 FAM81AQ8TBF8 368 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 OTULINQ96BN8 352 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 GMPPAQ96IJ6 420 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 MBOAT4Q96T53 435 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 SF3B5Q9BWJ5 86 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 TXNIPQ9H3M7 391 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 SLC25A19Q9HC21 320 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 FAM118AQ9NWS6 357 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 KCNS2Q9ULS6 477 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 EMC9Q9Y3B6 208 aa10.91□□□□□ -0.66
CLSTN3-208ENST00000538933 ARFGEF3Q5TH69 2177 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 TEX13CA0A0J9YWL9 993 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 LOC100289279A0A1B0GTE1 492 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 A6NIZ1 184 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 RIIAD1A6NNX1 92 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 ZAR1LA6NP61 321 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 H0YAE9 185 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 GPR171O14626 319 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 IDH3BO43837 385 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 FZD7O75084 574 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 IFNGR1P15260 489 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF3P17036 446 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms