RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 WNT5AP41221 380 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 MRPL19P49406 292 aaKnown RBP19.22■□□□□ 0.67
PVT1-218ENST00000523328 SLC3A1Q07837 685 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 HNRNPA0Q13151 305 aaKnown RBP19.22■□□□□ 0.67
PVT1-218ENST00000523328 NPTX1Q15818 432 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 ZNF718Q3SXZ3 478 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 SPRNQ5BIV9 151 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 PABPC1L2AQ5JQF8 200 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 KLF17Q5JT82 389 aaPredicted RBP19.22■□□□□ 0.67
PVT1-218ENST00000523328 PAGE3Q5JUK9 113 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 SPATA46Q5T0L3 261 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 THEM4Q5T1C6 240 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 BCL6BQ8N143 479 aaPredicted RBP19.22■□□□□ 0.67
PVT1-218ENST00000523328 SMYD1Q8NB12 490 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 ZNF48Q96MX3 618 aaPredicted RBP19.22■□□□□ 0.67
PVT1-218ENST00000523328 SEPHS2Q99611 448 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 PURGQ9UJV8 347 aaKnown RBP19.22■□□□□ 0.67
PVT1-218ENST00000523328 ZNF229Q9UJW7 825 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 CCNOP22674 350 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 GCH1P30793 250 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 ATP4BP51164 291 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 ZNF84P51523 738 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 CLRN1P58418 232 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 HSF2Q03933 536 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 DUSP7Q16829 419 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 ARMCX4Q5H9R4 360 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 ENTPD8Q5MY95 495 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 MBNL2Q5VZF2 373 aaKnown RBP19.21■□□□□ 0.67
PVT1-218ENST00000523328 BLOC1S3Q6QNY0 202 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 HIPK4Q8NE63 616 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 OR6T1Q8NGN1 323 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 TRIM44Q96DX7 344 aaPredicted RBP19.21■□□□□ 0.67
PVT1-218ENST00000523328 POM121L2Q96KW2 1035 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 GPA33Q99795 319 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 ZNF426Q9BUY5 554 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 DCAF16Q9NXF7 216 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 PLEK2Q9NYT0 353 aa19.21■□□□□ 0.67
PVT1-218ENST00000523328 POLR3KQ9Y2Y1 108 aaPredicted RBP19.21■□□□□ 0.67
PVT1-218ENST00000523328 PLSCR5A0PG75 271 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 TMEM120BA0PK00 339 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 CPSF4LA6NMK7 179 aaKnown RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 TRAPPC2LH3BP13 241 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 MGRN1O60291 552 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 RNASE1P07998 156 aaKnown RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 STOMP27105 288 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 ZNF133P52736 654 aaPredicted RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 PCBP3P57721 371 aaKnown RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 ZNF154Q13106 437 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 TTC33Q6PID6 262 aaPredicted RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 TSPYL5Q86VY4 417 aaPredicted RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 NOXO1Q8NFA2 376 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 GPR32P1Q8NGA4 272 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 SLC25A40Q8TBP6 338 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 KLF14Q8TD94 323 aaPredicted RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 ADAMTS16Q8TE57 1224 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 GEMIN6Q8WXD5 167 aaKnown RBP19.2■□□□□ 0.66
PVT1-218ENST00000523328 EGLN1Q9GZT9 426 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 NPHS2Q9NP85 383 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 KLHL21Q9UJP4 597 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 NPTNQ9Y639 398 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 AUP1Q9Y679 476 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 VWFP04275 2813 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 CMYA5Q8N3K9 4069 aa19.2■□□□□ 0.66
PVT1-218ENST00000523328 LOC100509620A0A075B734 347 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 POM121CA8CG34 1229 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 KPNA4O00629 521 aaPredicted RBP19.19■□□□□ 0.66
PVT1-218ENST00000523328 IGHV2-70P01814 119 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 IL13RA1P78552 427 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 BAMBIQ13145 260 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 C10orf128Q5T292 105 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 RBM45Q8IUH3 476 aaKnown RBP19.19■□□□□ 0.66
PVT1-218ENST00000523328 SYT14Q8NB59 555 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 OR4D11Q8NGI4 311 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 SPDL1Q96EA4 605 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 OR2J1Q9GZK6 312 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 SIAEQ9HAT2 523 aa19.19■□□□□ 0.66
PVT1-218ENST00000523328 CENPBD1B2RD01 187 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 IGHMP01871 453 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 OPN1SWP03999 348 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 CD55P08174 381 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 ZNF12P17014 697 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 ZNF32P17041 273 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 CDAP32320 146 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 RBMXP38159 391 aaKnown RBP19.18■□□□□ 0.66
PVT1-218ENST00000523328 MRPS34P82930 218 aaKnown RBP19.18■□□□□ 0.66
PVT1-218ENST00000523328 EPGNQ6UW88 154 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 NANOGNBQ7Z5D8 188 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 ASB10Q8WXI3 467 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 TAF15Q92804 592 aaKnown RBP eCLIP19.18■□□□□ 0.668e-6■□□□□ 10.8
PVT1-218ENST00000523328 NABP1Q96AH0 204 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 SLC19A3Q9BZV2 496 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 CYSLTR2Q9NS75 346 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 SLC7A7Q9UM01 511 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 CORO2BQ9UQ03 480 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 ANGPT4Q9Y264 503 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 UGT2A1Q9Y4X1 527 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 INSIG2Q9Y5U4 225 aa19.18■□□□□ 0.66
PVT1-218ENST00000523328 PRKDCP78527 4128 aaKnown RBP19.17■□□□□ 0.66
PVT1-218ENST00000523328 C5orf49A4QMS7 147 aa19.17■□□□□ 0.66
PVT1-218ENST00000523328 BLOC1S5-TXNDC5H3BN57 136 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms