RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 LEG1Q6P5S2 330 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 ZNF613Q6PF04 617 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 LINC00114Q6XXX2 140 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 BCL6BQ8N143 479 aaPredicted RBP14.92□□□□□ -0.02
NUP50-218ENST00000493456 OR9I1Q8NGQ6 314 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 MCHR2Q969V1 340 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 MARS2Q96GW9 593 aaKnown RBP14.92□□□□□ -0.02
NUP50-218ENST00000493456 MS4A7Q9GZW8 240 aaPredicted RBP14.92□□□□□ -0.02
NUP50-218ENST00000493456 KCNN2Q9H2S1 579 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 SLCO1B3Q9NPD5 702 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 NANSQ9NR45 359 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 EIF3KQ9UBQ5 218 aaKnown RBP14.92□□□□□ -0.02
NUP50-218ENST00000493456 CENPBD1B2RD01 187 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 TRAPPC2LH3BP13 241 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 SERPINB7O75635 380 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 MDKP21741 143 aaPredicted RBP14.91□□□□□ -0.02
NUP50-218ENST00000493456 STOMP27105 288 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 MPV17P39210 176 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 HIST3H3Q16695 136 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 TMEM155Q4W5P6 130 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 PABPC1L2AQ5JQF8 200 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 SPATA46Q5T0L3 261 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 THEM4Q5T1C6 240 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 C9orf139Q6ZV77 190 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 ZNF101Q8IZC7 436 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 HIPK4Q8NE63 616 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 KLF14Q8TD94 323 aaPredicted RBP14.91□□□□□ -0.02
NUP50-218ENST00000493456 SLC19A3Q9BZV2 496 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 PATZ1Q9HBE1 687 aaKnown RBP14.91□□□□□ -0.02
NUP50-218ENST00000493456 NPHS2Q9NP85 383 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 THAP1Q9NVV9 213 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 ZNF229Q9UJW7 825 aa14.91□□□□□ -0.02
NUP50-218ENST00000493456 A0A1B0GUS0 222 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 UBDO15205 165 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 CH25HO95992 272 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 SBK2P0C263 348 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 PPIAL4GP0DN37 164 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 KITP10721 976 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 PPIBP23284 216 aaKnown RBP14.9□□□□□ -0.02
NUP50-218ENST00000493456 SLC6A9P48067 706 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 VSNL1P62760 191 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 TMEM255AQ5JRV8 349 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 SLC2A7Q6PXP3 512 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 HDDC2Q7Z4H3 204 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 ARMC8Q8IUR7 673 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 LRRC18Q8N456 261 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 NOXO1Q8NFA2 376 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 SLC25A40Q8TBP6 338 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 GEMIN6Q8WXD5 167 aaKnown RBP14.9□□□□□ -0.02
NUP50-218ENST00000493456 TMIGD2Q96BF3 282 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 POM121L2Q96KW2 1035 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 SEPHS2Q99611 448 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 WFDC6Q9BQY6 131 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 OR2J1Q9GZK6 312 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 TMEM38AQ9H6F2 299 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 SIAEQ9HAT2 523 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 CCNB1IP1Q9NPC3 277 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 TMEM106BQ9NUM4 274 aa14.9□□□□□ -0.02
NUP50-218ENST00000493456 SNNO75324 88 aaPredicted RBP14.89□□□□□ -0.03
NUP50-218ENST00000493456 HIST1H2ABP04908 130 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 SLC6A2P23975 617 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 WNT5AP41221 380 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 SCARB2Q14108 478 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 MPP2Q14168 576 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 C10orf128Q5T292 105 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 LRIF1Q5T3J3 769 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 C16orf87Q6PH81 154 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 HIST3H2AQ7L7L0 130 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 AENQ8WTP8 325 aaKnown RBP14.89□□□□□ -0.03
NUP50-218ENST00000493456 HIST1H2ACQ93077 130 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 ZNF347Q96SE7 839 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 MCHR1Q99705 422 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 PAIP2Q9BPZ3 127 aaKnown RBP14.89□□□□□ -0.03
NUP50-218ENST00000493456 MRPL13Q9BYD1 178 aaKnown RBP14.89□□□□□ -0.03
NUP50-218ENST00000493456 SLC25A37Q9NYZ2 338 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 OR5V1Q9UGF6 321 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 KLHL21Q9UJP4 597 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 GMEB1Q9Y692 573 aa14.89□□□□□ -0.03
NUP50-218ENST00000493456 C5orf49A4QMS7 147 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 F5H0A9 414 aaPredicted RBP14.88□□□□□ -0.03
NUP50-218ENST00000493456 ICMTO60725 284 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 KNG1P01042 644 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 ASAH2BP0C7U1 165 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 GDI2P50395 445 aaKnown RBP14.88□□□□□ -0.03
NUP50-218ENST00000493456 ZNF133P52736 654 aaPredicted RBP14.88□□□□□ -0.03
NUP50-218ENST00000493456 BTG1P62324 171 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 MRPS34P82930 218 aaKnown RBP14.88□□□□□ -0.03
NUP50-218ENST00000493456 TNFAIP6P98066 277 aaPredicted RBP14.88□□□□□ -0.03
NUP50-218ENST00000493456 ESCO2Q56NI9 601 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 ZNF362Q5T0B9 420 aaPredicted RBP14.88□□□□□ -0.03
NUP50-218ENST00000493456 TTC33Q6PID6 262 aaPredicted RBP14.88□□□□□ -0.03
NUP50-218ENST00000493456 SPATC1Q76KD6 591 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 NANOGNBQ7Z5D8 188 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 ZER1Q7Z7L7 766 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 PARP8Q8N3A8 854 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 ZNF283Q8N7M2 679 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 OR52E2Q8NGJ4 325 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 WFDC12Q8WWY7 111 aa14.88□□□□□ -0.03
NUP50-218ENST00000493456 DCLRE1CQ96SD1 692 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms