RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 IPCEF1Q8WWN9 437 aaPredicted RBP6.91□□□□□ -1.3
USP39-216ENST00000490193 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 MAL2Q969L2 176 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 TMIGD2Q96BF3 282 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 MARS2Q96GW9 593 aaKnown RBP6.91□□□□□ -1.3
USP39-216ENST00000490193 DIRC2Q96SL1 478 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 SEPHS2Q99611 448 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 MRI1Q9BV20 369 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 TMEM109Q9BVC6 243 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 SPATA5L1Q9BVQ7 753 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 EGLN1Q9GZT9 426 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 PAIP1Q9H074 479 aaKnown RBP6.91□□□□□ -1.3
USP39-216ENST00000490193 OR51B6Q9H340 312 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 PRDM13Q9H4Q3 707 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 RNF121Q9H920 327 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 PATZ1Q9HBE1 687 aaKnown RBP6.91□□□□□ -1.3
USP39-216ENST00000490193 TMEM27Q9HBJ8 222 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 SSU72Q9NP77 194 aaKnown RBP6.91□□□□□ -1.3
USP39-216ENST00000490193 NPHS2Q9NP85 383 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 SDR39U1Q9NRG7 319 aaPredicted RBP6.91□□□□□ -1.3
USP39-216ENST00000490193 CYSLTR2Q9NS75 346 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 PNPOQ9NVS9 261 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 UBAP1Q9NZ09 502 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 SELENONQ9NZV5 590 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 ZIM2Q9NZV7 527 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 KLHL21Q9UJP4 597 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 ZDHHC8Q9ULC8 765 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 TRIM33Q9UPN9 1127 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 NPTNQ9Y639 398 aa6.91□□□□□ -1.3
USP39-216ENST00000490193 PLSCR5A0PG75 271 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 CENPBD1B2RD01 187 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 C5orf58C9J3I9 102 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 C11orf98E9PRG8 122 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 CLIC1O00299 241 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 HDAC3O15379 428 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 SPRY3O43610 288 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 TPST1O60507 370 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 FMO6PO60774 539 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 SERPINI2O75830 405 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 PLATP00750 562 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 QDPRP09417 244 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 CPT2P23786 658 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 EPHA3P29320 983 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 APLNRP35414 380 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 MPV17P39210 176 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 WNT5AP41221 380 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 CDH12P55289 794 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 RGS8P57771 180 aaPredicted RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 PAX2Q02962 417 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 GLO1Q04760 184 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 PAX8Q06710 450 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 IFFO1Q0D2I5 559 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 STX3Q13277 289 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 ZNF74Q16587 644 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 ZMAT1Q5H9K5 638 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 ZNF362Q5T0B9 420 aaPredicted RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 ZNF613Q6PF04 617 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 C16orf87Q6PH81 154 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 UNQ6126/PRO20091Q6UXV3 157 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 KRT73Q86Y46 540 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 ZNF101Q8IZC7 436 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 KLHL36Q8N4N3 616 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 ZNF283Q8N7M2 679 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 ICA1LQ8NDH6 482 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 BHLHE22Q8NFJ8 381 aaPredicted RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 KLF14Q8TD94 323 aaPredicted RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 GTF2H4Q92759 462 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 MAELQ96JY0 434 aaKnown RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 POM121L2Q96KW2 1035 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 CITED1Q99966 193 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 MRPL13Q9BYD1 178 aaKnown RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 MS4A7Q9GZW8 240 aaPredicted RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 MMP27Q9H306 513 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 WDR55Q9H6Y2 383 aaPredicted RBP6.9□□□□□ -1.3
USP39-216ENST00000490193 SLCO1B3Q9NPD5 702 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 TAS2R5Q9NYW4 299 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 IL20RAQ9UHF4 553 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 GMEB1Q9Y692 573 aa6.9□□□□□ -1.3
USP39-216ENST00000490193 DOCK11Q5JSL3 2073 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 PRORSD1PA6NEY8 169 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 TRPC5OSA6NMA1 111 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 CHP2O43745 196 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 OR6A2O95222 327 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 KNG1P01042 644 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 IGHG1P01857 330 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 BGNP21810 368 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 STOMP27105 288 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 MAP2K3P46734 347 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 ZNF84P51523 738 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 POLR2JP52435 117 aaKnown RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 SEC61A1P61619 476 aaKnown RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 MRPS34P82930 218 aaKnown RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 CDK6Q00534 326 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 BST1Q10588 318 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 MELKQ14680 651 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 SPRNQ5BIV9 151 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 PABPC1L2AQ5JQF8 200 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 C6orf10Q5SRN2 563 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 THEM4Q5T1C6 240 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 C10orf128Q5T292 105 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms