RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CLDND1Q9NY35 253 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 FGF16O43320 207 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 OR1F1O43749 312 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 ZNF432O94892 652 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 FOSL2P15408 326 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 MNDAP41218 407 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 MRPS10P82664 201 aaKnown RBP14.71□□□□□ -0.05
MCF2L-229ENST00000488765 NKAIN2Q5VXU1 208 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 PLPP4Q5VZY2 271 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 RPL13AP3Q6NVV1 102 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 ZNF529Q6P280 563 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 BPIFB2Q8N4F0 458 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 FOXN4Q96NZ1 517 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 ZNF587Q96SQ5 575 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-229ENST00000488765 ACTRT3Q9BYD9 372 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 INSL5Q9Y5Q6 135 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 NME2P1O60361 137 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 SLCO2B1O94956 709 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 PBX2P40425 430 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 CAV2P51636 162 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 STARD6P59095 220 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 SLC39A5Q6ZMH5 540 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 PLPP7Q8NBV4 271 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 OR9A2Q8NGT5 310 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 OR7D2Q96RA2 312 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 NMNAT3Q96T66 252 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 ZNF223Q9UK11 482 aaPredicted RBP14.71□□□□□ -0.06
MCF2L-229ENST00000488765 ICKQ9UPZ9 632 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 MRPS33Q9Y291 106 aaKnown RBP14.71□□□□□ -0.06
MCF2L-229ENST00000488765 CHD9Q3L8U1 2897 aa14.71□□□□□ -0.06
MCF2L-229ENST00000488765 WDR87Q6ZQQ6 2873 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 C9orf170A2RU37 121 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 PMS2P2O95744 297 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 HIST1H1CP16403 213 aaKnown RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 SSR2P43308 183 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 FHITP49789 147 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 CXADRP78310 365 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 ZNF674Q2M3X9 581 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 REC114Q7Z4M0 266 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 OR4N5Q8IXE1 308 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 TEX19Q8NA77 164 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 ZSCAN4Q8NAM6 433 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 ADAD2Q8NCV1 583 aaKnown RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 CYB5D2Q8WUJ1 264 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 BPIFA2Q96DR5 249 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 PHYHIPLQ96FC7 376 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 TOX2Q96NM4 488 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 EFCAB11Q9BUY7 163 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 CERS4Q9HA82 394 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 MED17Q9NVC6 651 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 LPAR3Q9UBY5 353 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 CLDN4O14493 209 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 TGM5O43548 720 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 ADAP1O75689 374 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 SNAPC5O75971 98 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 C1orf105O95561 183 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 SOD2P04179 222 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 FOLR2P14207 255 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 EPCAMP16422 314 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 ZNF616Q08AN1 781 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 RPL7L1Q6DKI1 246 aaKnown RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 TMEM150AQ86TG1 271 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 MITD1Q8WV92 249 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 CAMK1GQ96NX5 476 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 UTP23Q9BRU9 249 aaKnown RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 KLF16Q9BXK1 252 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 POLE3Q9NRF9 147 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 SPTBN5Q9NRC6 3674 aaKnown RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 TMEM235A6NFC5 223 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 LEFTY2O00292 366 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 FOXE1O00358 373 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 HOXC4P09017 264 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 SERPINF1P36955 418 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 TCEA2Q15560 299 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 MPPED2Q15777 294 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 Q6ZVU0 165 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 SLC35F2Q8IXU6 374 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 CCDC107Q8WV48 283 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 PPP1R14AQ96A00 147 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 INTS14Q96SY0 518 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 G6PC3Q9BUM1 346 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 CMC2Q9NRP2 79 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 FAM212BQ9NTI7 297 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-229ENST00000488765 PPP4R1LQ9P1A2 415 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 IL36AQ9UHA7 158 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 FBXO7Q9Y3I1 522 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 HCFC2Q9Y5Z7 792 aa14.7□□□□□ -0.06
MCF2L-229ENST00000488765 TRBV23OR9-2A0A075B6M9 112 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 A0A1B0GWJ7 208 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 CSF1P09603 554 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 MDKP21741 143 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-229ENST00000488765 BSGP35613 385 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 SULT1A1P50225 295 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 DECR1Q16698 335 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 CDNFQ49AH0 187 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 ZNF385CQ66K41 422 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-229ENST00000488765 TMEM25Q86YD3 366 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 GVQW1Q8N7I0 195 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 OR2A12Q8NGT7 310 aa14.69□□□□□ -0.06
MCF2L-229ENST00000488765 NUDCD2Q8WVJ2 157 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms